Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population

ABSTRACT: Objective: The association of variants in CLU, CR1, PICALM, BIN1, ABCA7, and CD33 genes with late-onset Alzheimer’s disease (LOAD) was evaluated and confirmed through genome-wide association study. However, it is unknown whether these associations can be replicated in admixed populations....

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Autores:
Moreno García, Diana Jennifer
Ruíz Mendoza, Susana
Ríos Gallardo, Angela Magnolia
Lopera Restrepo, Francisco Javier
Ostos Alfonso, Henry
Marc Via, Marc
Bedoya Berrío, Gabriel de Jesús
Tipo de recurso:
Article of investigation
Fecha de publicación:
2017
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
spa
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/26742
Acceso en línea:
http://hdl.handle.net/10495/26742
Palabra clave:
Polymorphism Genetic
Polimorfismo Genético
Enfermedad de Alzheimer
Alzheimer Disease
Genética
Genetics
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
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repository_id_str
dc.title.spa.fl_str_mv Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
title Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
spellingShingle Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
Polymorphism Genetic
Polimorfismo Genético
Enfermedad de Alzheimer
Alzheimer Disease
Genética
Genetics
title_short Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
title_full Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
title_fullStr Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
title_full_unstemmed Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
title_sort Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population
dc.creator.fl_str_mv Moreno García, Diana Jennifer
Ruíz Mendoza, Susana
Ríos Gallardo, Angela Magnolia
Lopera Restrepo, Francisco Javier
Ostos Alfonso, Henry
Marc Via, Marc
Bedoya Berrío, Gabriel de Jesús
dc.contributor.author.none.fl_str_mv Moreno García, Diana Jennifer
Ruíz Mendoza, Susana
Ríos Gallardo, Angela Magnolia
Lopera Restrepo, Francisco Javier
Ostos Alfonso, Henry
Marc Via, Marc
Bedoya Berrío, Gabriel de Jesús
dc.contributor.researchgroup.spa.fl_str_mv Genética Molecular (GENMOL)
Grupo de Neurociencias de Antioquia
dc.subject.decs.none.fl_str_mv Polymorphism Genetic
Polimorfismo Genético
Enfermedad de Alzheimer
Alzheimer Disease
topic Polymorphism Genetic
Polimorfismo Genético
Enfermedad de Alzheimer
Alzheimer Disease
Genética
Genetics
dc.subject.lemb.none.fl_str_mv Genética
Genetics
description ABSTRACT: Objective: The association of variants in CLU, CR1, PICALM, BIN1, ABCA7, and CD33 genes with late-onset Alzheimer’s disease (LOAD) was evaluated and confirmed through genome-wide association study. However, it is unknown whether these associations can be replicated in admixed populations. Methods: The association of 14 single-nucleotide polymorphisms in those genes was evaluated in 280 LOAD cases and 357 controls from the Colombian population. Results: In a multivariate analysis using age, gender, APOEe4 status, and admixture covariates, significant associations were obtained (P < .05) for variants in BIN1 (rs744373, odds ratio [OR]: 1.42), CLU (rs11136000, OR: 0.66), PICALM (rs541458, OR: 0.69), ABCA7 (rs3764650, OR: 1.7), and CD33 (rs3865444, OR: 1.12). Likewise, a significant interaction effect was observed between CLU and CR1 variants with APOE. Conclusion: This study replicated the associations previously reported in populations of European ancestry and shows that APOE variants have a regulatory role on the effect that variants in other loci have on LOAD, reflecting the importance of gene–gene interactions in the etiology of neurodegenerative diseases.
publishDate 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2022-03-19T17:54:37Z
dc.date.available.none.fl_str_mv 2022-03-19T17:54:37Z
dc.type.spa.fl_str_mv Artículo de investigación
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dc.identifier.citation.spa.fl_str_mv Moreno, D., Ruiz, S., Ríos, Á., Lopera, F., Ostos, H., Via, M., & Bedoya, G. (2017). Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population. American Journal of Alzheimer’s Disease & Other Dementias®, 27–35. https://doi.org/10.1177/1533317516679303
dc.identifier.issn.none.fl_str_mv 1533-3175
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/26742
dc.identifier.doi.none.fl_str_mv 10.1177/1533317516679303
dc.identifier.eissn.none.fl_str_mv 1938-2731
identifier_str_mv Moreno, D., Ruiz, S., Ríos, Á., Lopera, F., Ostos, H., Via, M., & Bedoya, G. (2017). Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population. American Journal of Alzheimer’s Disease & Other Dementias®, 27–35. https://doi.org/10.1177/1533317516679303
1533-3175
10.1177/1533317516679303
1938-2731
url http://hdl.handle.net/10495/26742
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Am. J. Alzheimers Dis. Other Demen.
dc.relation.citationendpage.spa.fl_str_mv 35
dc.relation.citationissue.spa.fl_str_mv 1
dc.relation.citationstartpage.spa.fl_str_mv 27
dc.relation.citationvolume.spa.fl_str_mv 32
dc.relation.ispartofjournal.spa.fl_str_mv American Journal of Alzheimer's Disease and other Dementias
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dc.publisher.spa.fl_str_mv SAGE Publications
dc.publisher.place.spa.fl_str_mv Weston, Estados Unidos
institution Universidad de Antioquia
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spelling Moreno García, Diana JenniferRuíz Mendoza, SusanaRíos Gallardo, Angela MagnoliaLopera Restrepo, Francisco JavierOstos Alfonso, HenryMarc Via, MarcBedoya Berrío, Gabriel de JesúsGenética Molecular (GENMOL)Grupo de Neurociencias de Antioquia2022-03-19T17:54:37Z2022-03-19T17:54:37Z2017Moreno, D., Ruiz, S., Ríos, Á., Lopera, F., Ostos, H., Via, M., & Bedoya, G. (2017). Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian Population. American Journal of Alzheimer’s Disease & Other Dementias®, 27–35. https://doi.org/10.1177/15333175166793031533-3175http://hdl.handle.net/10495/2674210.1177/15333175166793031938-2731ABSTRACT: Objective: The association of variants in CLU, CR1, PICALM, BIN1, ABCA7, and CD33 genes with late-onset Alzheimer’s disease (LOAD) was evaluated and confirmed through genome-wide association study. However, it is unknown whether these associations can be replicated in admixed populations. Methods: The association of 14 single-nucleotide polymorphisms in those genes was evaluated in 280 LOAD cases and 357 controls from the Colombian population. Results: In a multivariate analysis using age, gender, APOEe4 status, and admixture covariates, significant associations were obtained (P < .05) for variants in BIN1 (rs744373, odds ratio [OR]: 1.42), CLU (rs11136000, OR: 0.66), PICALM (rs541458, OR: 0.69), ABCA7 (rs3764650, OR: 1.7), and CD33 (rs3865444, OR: 1.12). Likewise, a significant interaction effect was observed between CLU and CR1 variants with APOE. Conclusion: This study replicated the associations previously reported in populations of European ancestry and shows that APOE variants have a regulatory role on the effect that variants in other loci have on LOAD, reflecting the importance of gene–gene interactions in the etiology of neurodegenerative diseases.COL0006723COL00107449application/pdfspaSAGE PublicationsWeston, Estados Unidoshttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Association of GWAS Top Genes With Late-Onset Alzheimer’s Disease in Colombian PopulationArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionPolymorphism GeneticPolimorfismo GenéticoEnfermedad de AlzheimerAlzheimer DiseaseGenéticaGeneticsAm. J. Alzheimers Dis. 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