Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages

ABSTRACT: Background: Glycolytic inhibitor 2-deoxy-D-glucose (2-DG) binds to hexokinase in a non-competitive manner and phosphoglucose isomerase in a competitive manner, blocking the initial steps of the glycolytic pathway. Although 2-DG stimulates endoplasmic reticulum (ER) stress, activating the u...

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Autores:
Urcuqui Inchima, Silvio
Velilla Hernández, Paula Andrea
Tamayo Molina, Yordi Sebastián
Hernández Sarmiento, Lady Johana
Tipo de recurso:
Article of investigation
Fecha de publicación:
2023
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/35522
Acceso en línea:
https://hdl.handle.net/10495/35522
Palabra clave:
Desoxiglucosa
Deoxyglucose
Estrés del Retículo Endoplásmico
Endoplasmic Reticulum Stress
Respuesta de Proteína Desplegada
Unfolded Protein Response
Glicosilación
Glycosylation
Células
Cells
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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repository_id_str
dc.title.spa.fl_str_mv Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
title Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
spellingShingle Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
Desoxiglucosa
Deoxyglucose
Estrés del Retículo Endoplásmico
Endoplasmic Reticulum Stress
Respuesta de Proteína Desplegada
Unfolded Protein Response
Glicosilación
Glycosylation
Células
Cells
title_short Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
title_full Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
title_fullStr Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
title_full_unstemmed Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
title_sort Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages
dc.creator.fl_str_mv Urcuqui Inchima, Silvio
Velilla Hernández, Paula Andrea
Tamayo Molina, Yordi Sebastián
Hernández Sarmiento, Lady Johana
dc.contributor.author.none.fl_str_mv Urcuqui Inchima, Silvio
Velilla Hernández, Paula Andrea
Tamayo Molina, Yordi Sebastián
Hernández Sarmiento, Lady Johana
dc.contributor.researchgroup.spa.fl_str_mv Inmunovirología
dc.subject.decs.none.fl_str_mv Desoxiglucosa
Deoxyglucose
Estrés del Retículo Endoplásmico
Endoplasmic Reticulum Stress
Respuesta de Proteína Desplegada
Unfolded Protein Response
Glicosilación
Glycosylation
Células
Cells
topic Desoxiglucosa
Deoxyglucose
Estrés del Retículo Endoplásmico
Endoplasmic Reticulum Stress
Respuesta de Proteína Desplegada
Unfolded Protein Response
Glicosilación
Glycosylation
Células
Cells
description ABSTRACT: Background: Glycolytic inhibitor 2-deoxy-D-glucose (2-DG) binds to hexokinase in a non-competitive manner and phosphoglucose isomerase in a competitive manner, blocking the initial steps of the glycolytic pathway. Although 2-DG stimulates endoplasmic reticulum (ER) stress, activating the unfolded protein response to restore protein homeostasis, it is unclear which ER stress-related genes are modulated in response to 2-DG treatment in human primary cells. Here, we aimed to determine whether the treatment of monocytes and monocyte-derived macrophages (MDMs) with 2-DG leads to a transcriptional profile specific to ER stress. Methods: We performed bioinformatics analysis to identify differentially expressed genes (DEGs) in previously reported RNA-seq datasets of 2-DG treated cells. RT-qPCR was performed to verify the sequencing data on cultured MDMs. Results: A total of 95 common DEGs were found by transcriptional analysis of monocytes and MDMs treated with 2-DG. Among these, 74 were up-regulated and 21 were down-regulated. Multitranscript analysis showed that DEGs are linked to integrated stress response (GRP78/BiP, PERK, ATF4, CHOP, GADD34, IRE1α, XBP1, SESN2, ASNS, PHGDH), hexosamine biosynthetic pathway (GFAT1, GNA1, PGM3, UAP1), and mannose metabolism (GMPPA and GMPPB). Conclusions: Results reveal that 2-DG triggers a gene expression program that might be involved in restoring protein homeostasis in primary cells. General significance: 2-DG is known to inhibit glycolysis and induce ER stress; however, its effect on gene expression in primary cells is not well understood. This work shows that 2-DG is a stress inducer shifting the metabolic state of monocytes and macrophages
publishDate 2023
dc.date.accessioned.none.fl_str_mv 2023-06-15T18:10:26Z
dc.date.available.none.fl_str_mv 2023-06-15T18:10:26Z
dc.date.issued.none.fl_str_mv 2023
dc.type.spa.fl_str_mv Artículo de investigación
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dc.identifier.citation.spa.fl_str_mv Tamayo-Molina YS, Velilla PA, Hernández-Sarmiento LJ, Urcuqui-Inchima S. Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages. Biochim Biophys Acta Gen Subj. 2023 Jun 7;1867(9):130397. doi: 10.1016/j.bbagen.2023.130397. Epub ahead of print. PMID: 37290716.
dc.identifier.issn.none.fl_str_mv 0304-4165
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/35522
dc.identifier.doi.none.fl_str_mv 10.1016/j.bbagen.2023.130397
dc.identifier.eissn.none.fl_str_mv 1872-8006
identifier_str_mv Tamayo-Molina YS, Velilla PA, Hernández-Sarmiento LJ, Urcuqui-Inchima S. Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages. Biochim Biophys Acta Gen Subj. 2023 Jun 7;1867(9):130397. doi: 10.1016/j.bbagen.2023.130397. Epub ahead of print. PMID: 37290716.
0304-4165
10.1016/j.bbagen.2023.130397
1872-8006
url https://hdl.handle.net/10495/35522
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Biochim. Biophys. Acta, Gen. Subj.
dc.relation.citationendpage.spa.fl_str_mv 9
dc.relation.citationissue.spa.fl_str_mv 9
dc.relation.citationstartpage.spa.fl_str_mv 1
dc.relation.citationvolume.spa.fl_str_mv 1867
dc.relation.ispartofjournal.spa.fl_str_mv Biochimica et Biophysica Acta - General Subjects
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dc.publisher.place.spa.fl_str_mv Ámsterdam, Países Bajos
institution Universidad de Antioquia
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spelling Urcuqui Inchima, SilvioVelilla Hernández, Paula AndreaTamayo Molina, Yordi SebastiánHernández Sarmiento, Lady JohanaInmunovirología2023-06-15T18:10:26Z2023-06-15T18:10:26Z2023Tamayo-Molina YS, Velilla PA, Hernández-Sarmiento LJ, Urcuqui-Inchima S. Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophages. Biochim Biophys Acta Gen Subj. 2023 Jun 7;1867(9):130397. doi: 10.1016/j.bbagen.2023.130397. Epub ahead of print. PMID: 37290716.0304-4165https://hdl.handle.net/10495/3552210.1016/j.bbagen.2023.1303971872-8006ABSTRACT: Background: Glycolytic inhibitor 2-deoxy-D-glucose (2-DG) binds to hexokinase in a non-competitive manner and phosphoglucose isomerase in a competitive manner, blocking the initial steps of the glycolytic pathway. Although 2-DG stimulates endoplasmic reticulum (ER) stress, activating the unfolded protein response to restore protein homeostasis, it is unclear which ER stress-related genes are modulated in response to 2-DG treatment in human primary cells. Here, we aimed to determine whether the treatment of monocytes and monocyte-derived macrophages (MDMs) with 2-DG leads to a transcriptional profile specific to ER stress. Methods: We performed bioinformatics analysis to identify differentially expressed genes (DEGs) in previously reported RNA-seq datasets of 2-DG treated cells. RT-qPCR was performed to verify the sequencing data on cultured MDMs. Results: A total of 95 common DEGs were found by transcriptional analysis of monocytes and MDMs treated with 2-DG. Among these, 74 were up-regulated and 21 were down-regulated. Multitranscript analysis showed that DEGs are linked to integrated stress response (GRP78/BiP, PERK, ATF4, CHOP, GADD34, IRE1α, XBP1, SESN2, ASNS, PHGDH), hexosamine biosynthetic pathway (GFAT1, GNA1, PGM3, UAP1), and mannose metabolism (GMPPA and GMPPB). Conclusions: Results reveal that 2-DG triggers a gene expression program that might be involved in restoring protein homeostasis in primary cells. General significance: 2-DG is known to inhibit glycolysis and induce ER stress; however, its effect on gene expression in primary cells is not well understood. This work shows that 2-DG is a stress inducer shifting the metabolic state of monocytes and macrophagesUniversidad de Antioquia. Vicerrectoría de investigación. Comité para el Desarrollo de la Investigación - CODIColombia. Ministerio de Ciencia Tecnología e Innovación - MinicienciasCOL00124449application/pdfengElsevierÁmsterdam, Países Bajoshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Multitranscript analysis reveals an effect of 2-deoxy-d-glucose on gene expression linked to unfolded protein response and integrated stress response in primary human monocytes and monocyte-derived macrophagesArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionDesoxiglucosaDeoxyglucoseEstrés del Retículo EndoplásmicoEndoplasmic Reticulum StressRespuesta de Proteína DesplegadaUnfolded Protein ResponseGlicosilaciónGlycosylationCélulasCellsBiochim. Biophys. Acta, Gen. 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