Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer

ABSTRACT: Up to 10% of cases of gastric cancer are familial, but so far, only mutations in CDH1 have been associated with gastric cancer risk. To identify genetic variants that affect risk for gastric cancer, we collected blood samples from 28 patients with hereditary diffuse gastric cancer (HDGC) n...

Full description

Autores:
González Castrillón, Luz María
Cock Rada, Alicia María
Bohorquez Lozano, Mabel Elena
Toa, Ted
Estrada Flórez, Ana Patricia
Suárez Olaya, John Jairo
Brea Fernández, Alejandro
Cameselle Teijeiro, José
Pinto, Carla
Ramos, Irma
Mantilla Morales, Alejandra
Prieto Sánchez, Rodrigo
Corvalán, Alejandro
Norero, Enrique
Álvarez, Carolina
Tapia, Teresa
Carvallo, Pilar
Sahasrabudhe, Ruta
Lott, Paul
Solano, Angela
Neffa, Florencia
Della Valle, Adriana
Yau, Chris
Soares, Gabriela
Borowsky, Alexander
Hu, Nan
He, Li-Ji
Han, Xiao-You
Taylor, Philip R.
Goldstein, Alisa M.
Torres, Javier
Echeverry De Polanco, María Magdalena
Ruiz Ponte, Clara
Rodrigues Teixeira, Manuel António
Carvajal Carmona, Luis Guillermo
Tipo de recurso:
Article of investigation
Fecha de publicación:
2017
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/34012
Acceso en línea:
https://hdl.handle.net/10495/34012
Palabra clave:
Stomach
Estómago
Stomach Neoplasms
Neoplasias Gástricas
Whole Exome Sequencing
Secuenciación del Exoma Completo
Fanconi Anemia Complementation Group N Protein
Proteína del Grupo de Complementación N de la Anemia de Fanconi
BRCA1 Protein
Proteína BRCA1
Recombinational DNA Repair
Reparación del ADN por Recombinación
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_4fa6b958af682657950b7810fd4b0730
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/34012
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
title Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
spellingShingle Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
Stomach
Estómago
Stomach Neoplasms
Neoplasias Gástricas
Whole Exome Sequencing
Secuenciación del Exoma Completo
Fanconi Anemia Complementation Group N Protein
Proteína del Grupo de Complementación N de la Anemia de Fanconi
BRCA1 Protein
Proteína BRCA1
Recombinational DNA Repair
Reparación del ADN por Recombinación
title_short Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
title_full Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
title_fullStr Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
title_full_unstemmed Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
title_sort Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric Cancer
dc.creator.fl_str_mv González Castrillón, Luz María
Cock Rada, Alicia María
Bohorquez Lozano, Mabel Elena
Toa, Ted
Estrada Flórez, Ana Patricia
Suárez Olaya, John Jairo
Brea Fernández, Alejandro
Cameselle Teijeiro, José
Pinto, Carla
Ramos, Irma
Mantilla Morales, Alejandra
Prieto Sánchez, Rodrigo
Corvalán, Alejandro
Norero, Enrique
Álvarez, Carolina
Tapia, Teresa
Carvallo, Pilar
Sahasrabudhe, Ruta
Lott, Paul
Solano, Angela
Neffa, Florencia
Della Valle, Adriana
Yau, Chris
Soares, Gabriela
Borowsky, Alexander
Hu, Nan
He, Li-Ji
Han, Xiao-You
Taylor, Philip R.
Goldstein, Alisa M.
Torres, Javier
Echeverry De Polanco, María Magdalena
Ruiz Ponte, Clara
Rodrigues Teixeira, Manuel António
Carvajal Carmona, Luis Guillermo
dc.contributor.author.none.fl_str_mv González Castrillón, Luz María
Cock Rada, Alicia María
Bohorquez Lozano, Mabel Elena
Toa, Ted
Estrada Flórez, Ana Patricia
Suárez Olaya, John Jairo
Brea Fernández, Alejandro
Cameselle Teijeiro, José
Pinto, Carla
Ramos, Irma
Mantilla Morales, Alejandra
Prieto Sánchez, Rodrigo
Corvalán, Alejandro
Norero, Enrique
Álvarez, Carolina
Tapia, Teresa
Carvallo, Pilar
Sahasrabudhe, Ruta
Lott, Paul
Solano, Angela
Neffa, Florencia
Della Valle, Adriana
Yau, Chris
Soares, Gabriela
Borowsky, Alexander
Hu, Nan
He, Li-Ji
Han, Xiao-You
Taylor, Philip R.
Goldstein, Alisa M.
Torres, Javier
Echeverry De Polanco, María Magdalena
Ruiz Ponte, Clara
Rodrigues Teixeira, Manuel António
Carvajal Carmona, Luis Guillermo
dc.contributor.researchgroup.spa.fl_str_mv Genética Médica
dc.subject.decs.none.fl_str_mv Stomach
Estómago
Stomach Neoplasms
Neoplasias Gástricas
Whole Exome Sequencing
Secuenciación del Exoma Completo
Fanconi Anemia Complementation Group N Protein
Proteína del Grupo de Complementación N de la Anemia de Fanconi
BRCA1 Protein
Proteína BRCA1
Recombinational DNA Repair
Reparación del ADN por Recombinación
topic Stomach
Estómago
Stomach Neoplasms
Neoplasias Gástricas
Whole Exome Sequencing
Secuenciación del Exoma Completo
Fanconi Anemia Complementation Group N Protein
Proteína del Grupo de Complementación N de la Anemia de Fanconi
BRCA1 Protein
Proteína BRCA1
Recombinational DNA Repair
Reparación del ADN por Recombinación
description ABSTRACT: Up to 10% of cases of gastric cancer are familial, but so far, only mutations in CDH1 have been associated with gastric cancer risk. To identify genetic variants that affect risk for gastric cancer, we collected blood samples from 28 patients with hereditary diffuse gastric cancer (HDGC) not associated with mutations in CDH1 and performed whole-exome sequence analysis. We then analyzed sequences of candidate genes in 333 independent HDGC and non-HDGC cases. We identified 11 cases with mutations in PALB2 , BRCA1 , or RAD51C genes, which regulate homologous DNA recombination. We found these mutations in 2 of 31 patients with HDGC (6.5%) and 9 of 331 patients with sporadic gastric cancer (2.8%). Most of these mutations had been previously associated with other types of tumors and partially co-segregated with gastric cancer in our study. Tumors that developed in patients with these mutations had a mutation signature associated with somatic homologous recombination deficiency. Our findings indicate that defects in homologous recombination increase risk for gastric cancer.
publishDate 2017
dc.date.issued.none.fl_str_mv 2017
dc.date.accessioned.none.fl_str_mv 2023-03-14T22:53:31Z
dc.date.available.none.fl_str_mv 2023-03-14T22:53:31Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
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dc.identifier.issn.none.fl_str_mv 0016-5085
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/34012
dc.identifier.doi.none.fl_str_mv 10.1053/j.gastro.2016.12.010
dc.identifier.eissn.none.fl_str_mv 1528-0012
identifier_str_mv 0016-5085
10.1053/j.gastro.2016.12.010
1528-0012
url https://hdl.handle.net/10495/34012
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Gastroenterology
dc.relation.citationendpage.spa.fl_str_mv 986
dc.relation.citationissue.spa.fl_str_mv 5
dc.relation.citationstartpage.spa.fl_str_mv 983
dc.relation.citationvolume.spa.fl_str_mv 152
dc.relation.ispartofjournal.spa.fl_str_mv Gastroenterology
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.extent.spa.fl_str_mv 10 páginas
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dc.publisher.spa.fl_str_mv Willians & Wilkins
dc.publisher.place.spa.fl_str_mv Baltimore, Estados Unidos
institution Universidad de Antioquia
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spelling González Castrillón, Luz MaríaCock Rada, Alicia MaríaBohorquez Lozano, Mabel ElenaToa, TedEstrada Flórez, Ana PatriciaSuárez Olaya, John JairoBrea Fernández, AlejandroCameselle Teijeiro, JoséPinto, CarlaRamos, IrmaMantilla Morales, AlejandraPrieto Sánchez, RodrigoCorvalán, AlejandroNorero, EnriqueÁlvarez, CarolinaTapia, TeresaCarvallo, PilarSahasrabudhe, RutaLott, PaulSolano, AngelaNeffa, FlorenciaDella Valle, AdrianaYau, ChrisSoares, GabrielaBorowsky, AlexanderHu, NanHe, Li-JiHan, Xiao-YouTaylor, Philip R.Goldstein, Alisa M.Torres, JavierEcheverry De Polanco, María MagdalenaRuiz Ponte, ClaraRodrigues Teixeira, Manuel AntónioCarvajal Carmona, Luis GuillermoGenética Médica2023-03-14T22:53:31Z2023-03-14T22:53:31Z20170016-5085https://hdl.handle.net/10495/3401210.1053/j.gastro.2016.12.0101528-0012ABSTRACT: Up to 10% of cases of gastric cancer are familial, but so far, only mutations in CDH1 have been associated with gastric cancer risk. To identify genetic variants that affect risk for gastric cancer, we collected blood samples from 28 patients with hereditary diffuse gastric cancer (HDGC) not associated with mutations in CDH1 and performed whole-exome sequence analysis. We then analyzed sequences of candidate genes in 333 independent HDGC and non-HDGC cases. We identified 11 cases with mutations in PALB2 , BRCA1 , or RAD51C genes, which regulate homologous DNA recombination. We found these mutations in 2 of 31 patients with HDGC (6.5%) and 9 of 331 patients with sporadic gastric cancer (2.8%). Most of these mutations had been previously associated with other types of tumors and partially co-segregated with gastric cancer in our study. Tumors that developed in patients with these mutations had a mutation signature associated with somatic homologous recombination deficiency. Our findings indicate that defects in homologous recombination increase risk for gastric cancer.COL005083910 páginasapplication/pdfengWillians & WilkinsBaltimore, Estados Unidoshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Germline Mutations in PALB2, BRCA1, and RAD51C, wich Regulate DNA Recombination Repair, in Patients with Gastric CancerArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionStomachEstómagoStomach NeoplasmsNeoplasias GástricasWhole Exome SequencingSecuenciación del Exoma CompletoFanconi Anemia Complementation Group N ProteinProteína del Grupo de Complementación N de la Anemia de FanconiBRCA1 ProteinProteína BRCA1Recombinational DNA RepairReparación del ADN por RecombinaciónGastroenterology9865983152GastroenterologyPublicationCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstreams/dbab0d5f-112e-4937-aedf-8e5c9a945565/downloadb88b088d9957e670ce3b3fbe2eedbc13MD52falseAnonymousREADORIGINALSahasrabudheRuta_2017_GermlineMutationsRegulate.pdfSahasrabudheRuta_2017_GermlineMutationsRegulate.pdfArtículo de investigaciónapplication/pdf1396082https://bibliotecadigital.udea.edu.co/bitstreams/6a5b0152-7c77-4004-8ccb-9f5a6605d12b/downloadae13e4fc48e5c8c4d9e222d498615e61MD51trueAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/a5ece3ac-8405-41b9-9fa5-035000b77329/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTSahasrabudheRuta_2017_GermlineMutationsRegulate.pdf.txtSahasrabudheRuta_2017_GermlineMutationsRegulate.pdf.txtExtracted texttext/plain44658https://bibliotecadigital.udea.edu.co/bitstreams/444a868b-f0ac-4f22-81b8-e2106f3d115e/download8ea19ff5ebb8846d12074a3717bcfbe4MD54falseAnonymousREADTHUMBNAILSahasrabudheRuta_2017_GermlineMutationsRegulate.pdf.jpgSahasrabudheRuta_2017_GermlineMutationsRegulate.pdf.jpgGenerated Thumbnailimage/jpeg19234https://bibliotecadigital.udea.edu.co/bitstreams/a2b7561b-5f35-41b3-acd5-3001a821f115/downloade26bc99a8c7a4afbefeda1964ff6fd70MD55falseAnonymousREAD10495/34012oai:bibliotecadigital.udea.edu.co:10495/340122025-03-27 01:16:50.32http://creativecommons.org/licenses/by-nc-nd/2.5/co/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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