Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences

An increasing population faces the growing demand for agricultural products and accurate global climate models that account for individual plant morphologies to predict favorable human habitat. Both demands are rooted in an improved understanding of the mechanistic origins of plant development. Such...

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Autores:
Tipo de recurso:
Book
Fecha de publicación:
2018
Institución:
Universidad de Bogotá Jorge Tadeo Lozano
Repositorio:
Expeditio: repositorio UTadeo
Idioma:
eng
OAI Identifier:
oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/14349
Acceso en línea:
https://www.frontiersin.org/research-topics/4300/plant-morphological-modeling-unleashing-geometric-and-topologic-potential-within-the-plant-sciences
http://hdl.handle.net/20.500.12010/14349
https://doi.org/10.3389/fpls.2016.00222
Palabra clave:
Botánica
Morfología vegetal
Ciencias Vegetales
Rights
License
Abierto (Texto Completo)
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dc.title.spa.fl_str_mv Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
title Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
spellingShingle Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
Botánica
Morfología vegetal
Ciencias Vegetales
title_short Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
title_full Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
title_fullStr Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
title_full_unstemmed Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
title_sort Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences
dc.subject.spa.fl_str_mv Botánica
topic Botánica
Morfología vegetal
Ciencias Vegetales
dc.subject.lemb.spa.fl_str_mv Morfología vegetal
Ciencias Vegetales
description An increasing population faces the growing demand for agricultural products and accurate global climate models that account for individual plant morphologies to predict favorable human habitat. Both demands are rooted in an improved understanding of the mechanistic origins of plant development. Such understanding requires geometric and topological descriptors to characterize the phenotype of plants and its link to genotypes. However, the current plant phenotyping framework relies on simple length and diameter measurements, which fail to capture the exquisite architecture of plants. The Research Topic “Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences” is the result of a workshop held at National Institute for Mathematical and Biological Synthesis (NIMBioS) in Knoxville, Tennessee. From 2.-4. September 2015 over 40 scientists from mathematics, computer science, engineering, physics and biology came together to set new frontiers in combining plant phenotyping with recent results from shape theory at the interface of geometry and topology. In doing so, the Research Topic synthesizes the views from multiple disciplines to reveal the potential of new mathematical concepts to analyze and quantify the relationship between morphological plant features. As such, the Research Topic bundles examples of new mathematical techniques including persistent homology, graph-theory, and shape statistics to tackle questions in crop breeding, developmental biology, and vegetation modeling. The challenge to model plant morphology under field conditions is a central theme of the included papers to address the problems of climate change and food security, that require the integration of plant biology and mathematics from geometry and topology research applied to imaging and simulation techniques. The introductory white paper written by the workshop participants identifies future directions in research, education and policy making to integrate biological and mathematical approaches and to strengthen research at the interface of both disciplines.
publishDate 2018
dc.date.created.none.fl_str_mv 2018-02-27
dc.date.accessioned.none.fl_str_mv 2020-10-10T22:17:11Z
dc.date.available.none.fl_str_mv 2020-10-10T22:17:11Z
dc.type.local.spa.fl_str_mv Libro
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format http://purl.org/coar/resource_type/c_2f33
dc.identifier.isbn.none.fl_str_mv 978-2-889-45297-2
dc.identifier.issn.none.fl_str_mv 1664-8714
dc.identifier.other.none.fl_str_mv https://www.frontiersin.org/research-topics/4300/plant-morphological-modeling-unleashing-geometric-and-topologic-potential-within-the-plant-sciences
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/20.500.12010/14349
dc.identifier.doi.none.fl_str_mv https://doi.org/10.3389/fpls.2016.00222
identifier_str_mv 978-2-889-45297-2
1664-8714
url https://www.frontiersin.org/research-topics/4300/plant-morphological-modeling-unleashing-geometric-and-topologic-potential-within-the-plant-sciences
http://hdl.handle.net/20.500.12010/14349
https://doi.org/10.3389/fpls.2016.00222
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.references.none.fl_str_mv Bucksch, A., Chitwood, D., eds. (2017). Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences. Lausanne: Frontiers Media. doi: 10.3389/978-2-88945-297-2
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dc.rights.local.spa.fl_str_mv Abierto (Texto Completo)
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rights_invalid_str_mv Abierto (Texto Completo)
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dc.format.extent.spa.fl_str_mv 298 páginas
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dc.publisher.spa.fl_str_mv Frontiers Media SA
institution Universidad de Bogotá Jorge Tadeo Lozano
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spelling 2020-10-10T22:17:11Z2020-10-10T22:17:11Z2018-02-27978-2-889-45297-21664-8714https://www.frontiersin.org/research-topics/4300/plant-morphological-modeling-unleashing-geometric-and-topologic-potential-within-the-plant-scienceshttp://hdl.handle.net/20.500.12010/14349https://doi.org/10.3389/fpls.2016.00222298 páginasapplication/pdfengFrontiers Media SABotánicaMorfología vegetalCiencias VegetalesMorphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant SciencesLibrohttp://purl.org/coar/resource_type/c_2f33Abierto (Texto Completo)https://creativecommons.org/licenses/by/4.0/legalcodehttp://purl.org/coar/access_right/c_abf2Bucksch, A., Chitwood, D., eds. (2017). Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences. Lausanne: Frontiers Media. doi: 10.3389/978-2-88945-297-2An increasing population faces the growing demand for agricultural products and accurate global climate models that account for individual plant morphologies to predict favorable human habitat. Both demands are rooted in an improved understanding of the mechanistic origins of plant development. Such understanding requires geometric and topological descriptors to characterize the phenotype of plants and its link to genotypes. However, the current plant phenotyping framework relies on simple length and diameter measurements, which fail to capture the exquisite architecture of plants. The Research Topic “Morphological Plant Modeling: Unleashing Geometric and Topological Potential within the Plant Sciences” is the result of a workshop held at National Institute for Mathematical and Biological Synthesis (NIMBioS) in Knoxville, Tennessee. From 2.-4. September 2015 over 40 scientists from mathematics, computer science, engineering, physics and biology came together to set new frontiers in combining plant phenotyping with recent results from shape theory at the interface of geometry and topology. In doing so, the Research Topic synthesizes the views from multiple disciplines to reveal the potential of new mathematical concepts to analyze and quantify the relationship between morphological plant features. As such, the Research Topic bundles examples of new mathematical techniques including persistent homology, graph-theory, and shape statistics to tackle questions in crop breeding, developmental biology, and vegetation modeling. The challenge to model plant morphology under field conditions is a central theme of the included papers to address the problems of climate change and food security, that require the integration of plant biology and mathematics from geometry and topology research applied to imaging and simulation techniques. The introductory white paper written by the workshop participants identifies future directions in research, education and policy making to integrate biological and mathematical approaches and to strengthen research at the interface of both disciplines.Bucksch, AlexanderChitwood, DanORIGINALMORPHOLOGICAL PLANT MODELING_34.PDFMORPHOLOGICAL PLANT MODELING_34.PDFVer documentoapplication/pdf71687562https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14349/1/MORPHOLOGICAL%20PLANT%20MODELING_34.PDFd69bd29e534829d7ca526c8a5742cc35MD51open accessLICENSElicense.txtlicense.txttext/plain; charset=utf-82938https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14349/2/license.txtabceeb1c943c50d3343516f9dbfc110fMD52open accessTHUMBNAILMORPHOLOGICAL PLANT MODELING_34.PDF.jpgMORPHOLOGICAL PLANT MODELING_34.PDF.jpgIM Thumbnailimage/jpeg34792https://expeditiorepositorio.utadeo.edu.co/bitstream/20.500.12010/14349/3/MORPHOLOGICAL%20PLANT%20MODELING_34.PDF.jpgcf7a6f2c59fa5a875a88c80e63176667MD53open access20.500.12010/14349oai:expeditiorepositorio.utadeo.edu.co:20.500.12010/143492021-01-25 07:44:03.038open accessRepositorio Institucional - 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