Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect

Cefazolin has become a prominent therapy for methicillin-susceptible Staphylococcus aureus (MSSA) infections. However, an important concern is the cefazolin inoculum effect (CzIE), a phenomenon mediated by staphylococcal β-lactamases. Four variants of staphylococcal β-lactamases have been described...

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Autores:
Carvajal Ortiz, Lina Paola
Rincon Núñez, Sandra
Echeverri Medina, Aura María
PORRAS GUZMAN, JESSICA
Rios, Rafael
Ordóñez, Karen Melissa
Seas, Carlos
Gomez-Villegas, Sara Isabel
Diaz, Lorena
Arias, Cesar A
Reyes, Jinnethe
Tipo de recurso:
https://purl.org/coar/resource_type/c_6501
Fecha de publicación:
2020
Institución:
Universidad El Bosque
Repositorio:
Repositorio U. El Bosque
Idioma:
eng
OAI Identifier:
oai:repositorio.unbosque.edu.co:20.500.12495/3499
Acceso en línea:
https://hdl.handle.net/20.500.12495/3499
https://doi.org/10.1128/aac.02511-19
https://repositorio.unbosque.edu.co
Palabra clave:
Staphylococcus aureus
Beta-Lactamasas
Cefazolina
Cefazolina
Rights
License
Acceso abierto
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oai_identifier_str oai:repositorio.unbosque.edu.co:20.500.12495/3499
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network_name_str Repositorio U. El Bosque
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dc.title.spa.fl_str_mv Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
dc.title.translated.spa.fl_str_mv Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
title Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
spellingShingle Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
Staphylococcus aureus
Beta-Lactamasas
Cefazolina
Cefazolina
title_short Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
title_full Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
title_fullStr Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
title_full_unstemmed Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
title_sort Novel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effect
dc.creator.fl_str_mv Carvajal Ortiz, Lina Paola
Rincon Núñez, Sandra
Echeverri Medina, Aura María
PORRAS GUZMAN, JESSICA
Rios, Rafael
Ordóñez, Karen Melissa
Seas, Carlos
Gomez-Villegas, Sara Isabel
Diaz, Lorena
Arias, Cesar A
Reyes, Jinnethe
dc.contributor.author.none.fl_str_mv Carvajal Ortiz, Lina Paola
Rincon Núñez, Sandra
Echeverri Medina, Aura María
PORRAS GUZMAN, JESSICA
Rios, Rafael
Ordóñez, Karen Melissa
Seas, Carlos
Gomez-Villegas, Sara Isabel
Diaz, Lorena
Arias, Cesar A
Reyes, Jinnethe
dc.contributor.orcid.none.fl_str_mv Rincon Núñez, Sandra [0000-0002-8482-4554]
Carvajal Ortiz, Lina Paola [0000-0001-8301-8836]
dc.subject.decs.spa.fl_str_mv Staphylococcus aureus
Beta-Lactamasas
Cefazolina
topic Staphylococcus aureus
Beta-Lactamasas
Cefazolina
Cefazolina
dc.subject.armarc.spa.fl_str_mv Cefazolina
description Cefazolin has become a prominent therapy for methicillin-susceptible Staphylococcus aureus (MSSA) infections. However, an important concern is the cefazolin inoculum effect (CzIE), a phenomenon mediated by staphylococcal β-lactamases. Four variants of staphylococcal β-lactamases have been described based on serological methodologies and limited sequence information. Here, we sought to reassess the classification of staphylococcal β-lactamases and their correlation with the CzIE. We included a large collection of 690 contemporary bloodstream MSSA isolates recovered from Latin America, a region with a high prevalence of the CzIE. We determined cefazolin MICs at standard and high inoculums by broth microdilution. Whole-genome sequencing was performed to classify the β-lactamase in each isolate based on the predicted full sequence of BlaZ. We used the classical schemes for β-lactamase classification and compared it to BlaZ allotypes found in unique sequences using the genomic information. Phylogenetic analyses were performed based on the BlaZ and core-genome sequences. The overall prevalence of the CzIE was 40%. Among 641 genomes, type C was the most predominant β-lactamase (37%), followed by type A (33%). We found 29 allotypes and 43 different substitutions in BlaZ. A single allotype, designated BlaZ-2, showed a robust and statistically significant association with the CzIE. Two other allotypes (BlaZ-3 and BlaZ-5) were associated with a lack of the CzIE. Three amino acid substitutions (A9V, E112A, and G145E) showed statistically significant association with the CzIE (P β <0.01). CC30 was the predominant clone among isolates displaying the CzIE. Thus, we provide a novel approach to the classification of the staphylococcal β-lactamases with the potential to more accurately identify MSSA strains exhibiting the CzIE.
publishDate 2020
dc.date.accessioned.none.fl_str_mv 2020-07-15T17:42:02Z
dc.date.available.none.fl_str_mv 2020-07-15T17:42:02Z
dc.date.issued.none.fl_str_mv 2020
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.coarversion.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.local.none.fl_str_mv Artículo de revista
dc.type.coar.none.fl_str_mv https://purl.org/coar/resource_type/c_6501
dc.type.driver.none.fl_str_mv info:eu-repo/semantics/article
format https://purl.org/coar/resource_type/c_6501
dc.identifier.issn.none.fl_str_mv 1098-6596
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/20.500.12495/3499
dc.identifier.doi.none.fl_str_mv https://doi.org/10.1128/aac.02511-19
dc.identifier.instname.spa.fl_str_mv instname:Universidad El Bosque
dc.identifier.reponame.spa.fl_str_mv reponame:Repositorio Institucional Universidad El Bosque
dc.identifier.repourl.none.fl_str_mv https://repositorio.unbosque.edu.co
identifier_str_mv 1098-6596
instname:Universidad El Bosque
reponame:Repositorio Institucional Universidad El Bosque
url https://hdl.handle.net/20.500.12495/3499
https://doi.org/10.1128/aac.02511-19
https://repositorio.unbosque.edu.co
dc.language.iso.none.fl_str_mv eng
language eng
dc.relation.ispartofseries.spa.fl_str_mv Antimicrobial agents and chemotherapy, 1098-6596, Vol. 64, Nro. 5, 2020
dc.relation.uri.none.fl_str_mv https://aac.asm.org/content/64/5/e02511-19.long
dc.rights.coar.fl_str_mv http://purl.org/coar/access_right/c_abf2
dc.rights.local.spa.fl_str_mv Acceso abierto
dc.rights.accessrights.none.fl_str_mv https://purl.org/coar/access_right/c_abf2
Acceso abierto
dc.rights.creativecommons.none.fl_str_mv 2020-05-01
rights_invalid_str_mv Acceso abierto
https://purl.org/coar/access_right/c_abf2
2020-05-01
http://purl.org/coar/access_right/c_abf2
dc.format.mimetype.none.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv American Society for Microbiology
dc.publisher.journal.spa.fl_str_mv Antimicrobial agents and chemotherapy
institution Universidad El Bosque
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spelling Carvajal Ortiz, Lina PaolaRincon Núñez, SandraEcheverri Medina, Aura MaríaPORRAS GUZMAN, JESSICARios, RafaelOrdóñez, Karen MelissaSeas, CarlosGomez-Villegas, Sara IsabelDiaz, LorenaArias, Cesar AReyes, JinnetheRincon Núñez, Sandra [0000-0002-8482-4554]Carvajal Ortiz, Lina Paola [0000-0001-8301-8836]2020-07-15T17:42:02Z2020-07-15T17:42:02Z20201098-6596https://hdl.handle.net/20.500.12495/3499https://doi.org/10.1128/aac.02511-19instname:Universidad El Bosquereponame:Repositorio Institucional Universidad El Bosquehttps://repositorio.unbosque.edu.coapplication/pdfengAmerican Society for MicrobiologyAntimicrobial agents and chemotherapyAntimicrobial agents and chemotherapy, 1098-6596, Vol. 64, Nro. 5, 2020https://aac.asm.org/content/64/5/e02511-19.longNovel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effectNovel insights into the classification of staphylococcal β-lactamases in relation to the cefazolin inoculum effectArtículo de revistahttps://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/articlehttp://purl.org/coar/version/c_970fb48d4fbd8a85Staphylococcus aureusBeta-LactamasasCefazolinaCefazolinaCefazolin has become a prominent therapy for methicillin-susceptible Staphylococcus aureus (MSSA) infections. However, an important concern is the cefazolin inoculum effect (CzIE), a phenomenon mediated by staphylococcal β-lactamases. Four variants of staphylococcal β-lactamases have been described based on serological methodologies and limited sequence information. Here, we sought to reassess the classification of staphylococcal β-lactamases and their correlation with the CzIE. We included a large collection of 690 contemporary bloodstream MSSA isolates recovered from Latin America, a region with a high prevalence of the CzIE. We determined cefazolin MICs at standard and high inoculums by broth microdilution. Whole-genome sequencing was performed to classify the β-lactamase in each isolate based on the predicted full sequence of BlaZ. We used the classical schemes for β-lactamase classification and compared it to BlaZ allotypes found in unique sequences using the genomic information. Phylogenetic analyses were performed based on the BlaZ and core-genome sequences. The overall prevalence of the CzIE was 40%. Among 641 genomes, type C was the most predominant β-lactamase (37%), followed by type A (33%). We found 29 allotypes and 43 different substitutions in BlaZ. A single allotype, designated BlaZ-2, showed a robust and statistically significant association with the CzIE. Two other allotypes (BlaZ-3 and BlaZ-5) were associated with a lack of the CzIE. Three amino acid substitutions (A9V, E112A, and G145E) showed statistically significant association with the CzIE (P β <0.01). CC30 was the predominant clone among isolates displaying the CzIE. Thus, we provide a novel approach to the classification of the staphylococcal β-lactamases with the potential to more accurately identify MSSA strains exhibiting the CzIE.Acceso abiertohttps://purl.org/coar/access_right/c_abf2Acceso abierto2020-05-01http://purl.org/coar/access_right/c_abf2LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://pruebas-update-repositorio-unbosque.cloudbiteca.com/bitstreams/54a3bd02-3ffc-4875-a996-0f78d44f087d/download8a4605be74aa9ea9d79846c1fba20a33MD52falseAnonymousREADTHUMBNAILCarvajal, L.P_2020.jpgCarvajal, L.P_2020.jpgimage/jpeg5775https://pruebas-update-repositorio-unbosque.cloudbiteca.com/bitstreams/9a159003-edb0-4e2c-9422-ef6501d30c7a/download7210a811635d1799e7c05fee5d259be7MD53falseAnonymousREAD20.500.12495/3499oai:pruebas-update-repositorio-unbosque.cloudbiteca.com:20.500.12495/34992022-05-03T02:34:46.825Zmetadata.onlyhttps://pruebas-update-repositorio-unbosque.cloudbiteca.comRepositorio Institucional Universidad El Bosquebibliotecas@biteca.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