Global diversity and distribution of nitrogen-fixing bacteria in the soil

ABSTRACT: Our knowledge of microbial biogeography has advanced in recent years, yet we lack knowledge of the global diversity of some important functional groups. Here, we used environmental DNA from 327 globally collected soil samples to investigate the biodiversity patterns of nitrogen-fixing bact...

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Autores:
Vasco Palacios, Aida Marcela
Kaarel Sepp, Siim
Vasar, Martti
Davison, John
Oja, Jane
Anslan, Sten
Al Quraishy, Saleh
Bahram, Mohammad
Bueno, Guillermo
Cantero, Juan José
Chimbioputo Fabiano, Ezequiel
Decocq, Guillaume
Drenkhan, Rein
Fraser, Lauchlan
Garibay Oriel, Roberto
Hiiesalu, Inga
Koorem, Kadri
Kõljalg, Urmas
Moora, Mari
Mucina, Ladislav
Öpik, Maarja
Põlme, Sergei
Pärtel, Meelis
Phosri, Cherdchai
Semchenko, Marina
Vahter, Tanel
Tedersoo, Leho
Zobel, Martin
Tipo de recurso:
Article of investigation
Fecha de publicación:
2023
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/43394
Acceso en línea:
https://hdl.handle.net/10495/43394
Palabra clave:
ARN Ribosómico 16S
RNA, Ribosomal, 16S
Diversidad microbiana
Microbial diversity
Fijación biológica del nitrógeno
Biological nitrogen fixation
Interacción biológica
Biological interaction
http://aims.fao.org/aos/agrovoc/c_7f962590
http://aims.fao.org/aos/agrovoc/c_27742
http://aims.fao.org/aos/agrovoc/c_49896
https://id.nlm.nih.gov/mesh/D012336
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
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network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Global diversity and distribution of nitrogen-fixing bacteria in the soil
title Global diversity and distribution of nitrogen-fixing bacteria in the soil
spellingShingle Global diversity and distribution of nitrogen-fixing bacteria in the soil
ARN Ribosómico 16S
RNA, Ribosomal, 16S
Diversidad microbiana
Microbial diversity
Fijación biológica del nitrógeno
Biological nitrogen fixation
Interacción biológica
Biological interaction
http://aims.fao.org/aos/agrovoc/c_7f962590
http://aims.fao.org/aos/agrovoc/c_27742
http://aims.fao.org/aos/agrovoc/c_49896
https://id.nlm.nih.gov/mesh/D012336
title_short Global diversity and distribution of nitrogen-fixing bacteria in the soil
title_full Global diversity and distribution of nitrogen-fixing bacteria in the soil
title_fullStr Global diversity and distribution of nitrogen-fixing bacteria in the soil
title_full_unstemmed Global diversity and distribution of nitrogen-fixing bacteria in the soil
title_sort Global diversity and distribution of nitrogen-fixing bacteria in the soil
dc.creator.fl_str_mv Vasco Palacios, Aida Marcela
Kaarel Sepp, Siim
Vasar, Martti
Davison, John
Oja, Jane
Anslan, Sten
Al Quraishy, Saleh
Bahram, Mohammad
Bueno, Guillermo
Cantero, Juan José
Chimbioputo Fabiano, Ezequiel
Decocq, Guillaume
Drenkhan, Rein
Fraser, Lauchlan
Garibay Oriel, Roberto
Hiiesalu, Inga
Koorem, Kadri
Kõljalg, Urmas
Moora, Mari
Mucina, Ladislav
Öpik, Maarja
Põlme, Sergei
Pärtel, Meelis
Phosri, Cherdchai
Semchenko, Marina
Vahter, Tanel
Tedersoo, Leho
Zobel, Martin
dc.contributor.author.none.fl_str_mv Vasco Palacios, Aida Marcela
Kaarel Sepp, Siim
Vasar, Martti
Davison, John
Oja, Jane
Anslan, Sten
Al Quraishy, Saleh
Bahram, Mohammad
Bueno, Guillermo
Cantero, Juan José
Chimbioputo Fabiano, Ezequiel
Decocq, Guillaume
Drenkhan, Rein
Fraser, Lauchlan
Garibay Oriel, Roberto
Hiiesalu, Inga
Koorem, Kadri
Kõljalg, Urmas
Moora, Mari
Mucina, Ladislav
Öpik, Maarja
Põlme, Sergei
Pärtel, Meelis
Phosri, Cherdchai
Semchenko, Marina
Vahter, Tanel
Tedersoo, Leho
Zobel, Martin
dc.contributor.researchgroup.spa.fl_str_mv BIOMICRO
Microbiología Ambiental
dc.subject.decs.none.fl_str_mv ARN Ribosómico 16S
RNA, Ribosomal, 16S
topic ARN Ribosómico 16S
RNA, Ribosomal, 16S
Diversidad microbiana
Microbial diversity
Fijación biológica del nitrógeno
Biological nitrogen fixation
Interacción biológica
Biological interaction
http://aims.fao.org/aos/agrovoc/c_7f962590
http://aims.fao.org/aos/agrovoc/c_27742
http://aims.fao.org/aos/agrovoc/c_49896
https://id.nlm.nih.gov/mesh/D012336
dc.subject.agrovoc.none.fl_str_mv Diversidad microbiana
Microbial diversity
Fijación biológica del nitrógeno
Biological nitrogen fixation
Interacción biológica
Biological interaction
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_7f962590
http://aims.fao.org/aos/agrovoc/c_27742
http://aims.fao.org/aos/agrovoc/c_49896
dc.subject.meshuri.none.fl_str_mv https://id.nlm.nih.gov/mesh/D012336
description ABSTRACT: Our knowledge of microbial biogeography has advanced in recent years, yet we lack knowledge of the global diversity of some important functional groups. Here, we used environmental DNA from 327 globally collected soil samples to investigate the biodiversity patterns of nitrogen-fixing bacteria by focusing on the nifH gene but also amplifying the general prokaryotic 16S SSU region. Globally, N-fixing prokaryotic communities are driven mainly by climatic conditions, with most groups being positively correlated with stable hot or seasonally humid climates. Among soil parameters, pH, but also soil N content were most often shown to correlate with the diversity of N-fixer groups. However, specific groups of N-fixing prokaryotes show contrasting responses to the same variables, notably in Cyanobacteria that were negatively correlated with stable hot climates, and showed a U-shaped correlation with soil pH, contrary to other N-fixers. Also, the non-N-fixing prokaryotic community composition was differentially correlated with the diversity and abundance of N-fixer groups, showing the often-neglected impact of biotic interactions among bacteria.
publishDate 2023
dc.date.issued.none.fl_str_mv 2023
dc.date.accessioned.none.fl_str_mv 2024-11-11T23:49:19Z
dc.date.available.none.fl_str_mv 2024-11-11T23:49:19Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
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dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/43394
dc.identifier.doi.none.fl_str_mv 10.3389/fpls.2023.1100235
dc.identifier.eissn.none.fl_str_mv 1664-462X
url https://hdl.handle.net/10495/43394
identifier_str_mv 10.3389/fpls.2023.1100235
1664-462X
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Front. Plant Sci.
dc.relation.citationendpage.spa.fl_str_mv 9
dc.relation.citationstartpage.spa.fl_str_mv 1
dc.relation.citationvolume.spa.fl_str_mv 14
dc.relation.ispartofjournal.spa.fl_str_mv Frontiers in Plant Science
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dc.format.extent.spa.fl_str_mv 9 páginas
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dc.publisher.spa.fl_str_mv Frontiers Research Foundation
dc.publisher.place.spa.fl_str_mv Lausana, Suiza
institution Universidad de Antioquia
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spelling Vasco Palacios, Aida MarcelaKaarel Sepp, SiimVasar, MarttiDavison, JohnOja, JaneAnslan, StenAl Quraishy, SalehBahram, MohammadBueno, GuillermoCantero, Juan JoséChimbioputo Fabiano, EzequielDecocq, GuillaumeDrenkhan, ReinFraser, LauchlanGaribay Oriel, RobertoHiiesalu, IngaKoorem, KadriKõljalg, UrmasMoora, MariMucina, LadislavÖpik, MaarjaPõlme, SergeiPärtel, MeelisPhosri, CherdchaiSemchenko, MarinaVahter, TanelTedersoo, LehoZobel, MartinBIOMICROMicrobiología Ambiental2024-11-11T23:49:19Z2024-11-11T23:49:19Z2023https://hdl.handle.net/10495/4339410.3389/fpls.2023.11002351664-462XABSTRACT: Our knowledge of microbial biogeography has advanced in recent years, yet we lack knowledge of the global diversity of some important functional groups. Here, we used environmental DNA from 327 globally collected soil samples to investigate the biodiversity patterns of nitrogen-fixing bacteria by focusing on the nifH gene but also amplifying the general prokaryotic 16S SSU region. Globally, N-fixing prokaryotic communities are driven mainly by climatic conditions, with most groups being positively correlated with stable hot or seasonally humid climates. Among soil parameters, pH, but also soil N content were most often shown to correlate with the diversity of N-fixer groups. However, specific groups of N-fixing prokaryotes show contrasting responses to the same variables, notably in Cyanobacteria that were negatively correlated with stable hot climates, and showed a U-shaped correlation with soil pH, contrary to other N-fixers. Also, the non-N-fixing prokaryotic community composition was differentially correlated with the diversity and abundance of N-fixer groups, showing the often-neglected impact of biotic interactions among bacteria.COL0111863COL00401899 páginasapplication/pdfengFrontiers Research FoundationLausana, Suizahttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Global diversity and distribution of nitrogen-fixing bacteria in the soilArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionARN Ribosómico 16SRNA, Ribosomal, 16SDiversidad microbianaMicrobial diversityFijación biológica del nitrógenoBiological nitrogen fixationInteracción biológicaBiological interactionhttp://aims.fao.org/aos/agrovoc/c_7f962590http://aims.fao.org/aos/agrovoc/c_27742http://aims.fao.org/aos/agrovoc/c_49896https://id.nlm.nih.gov/mesh/D012336Front. 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