Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent
ABSTRACT: The region of Antioquia in northeastern Colombia has the highest number of reported leptospirosis cases in the country. It also shows high seroprevalence indexes in the general population and socio-environmental conditions favourable for the transmission of the disease between humans and a...
- Autores:
-
López Quintero, Juan Álvaro
Peláez Sánchez, Ronald Guillermo
Pereira, Martha María
Arboleda Naranjo, Margarita
Agudelo Flórez, Piedad
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2016
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/38752
- Acceso en línea:
- https://hdl.handle.net/10495/38752
- Palabra clave:
- Leptospirosis
Leptospira
Colombia
Tipificación de Secuencias Multilocus
Multilocus Sequence Typing
Técnicas de Tipificación Bacteriana
Bacterial Typing Techniques
Electroforesis en Gel de Campo Pulsado
Electrophoresis, Gel, Pulsed-Field
Variación Genética
Genetic Variation
ARN Ribosómico 16S
RNA, Ribosomal, 16S
https://id.nlm.nih.gov/mesh/D007922
https://id.nlm.nih.gov/mesh/D007919
https://id.nlm.nih.gov/mesh/D003105
https://id.nlm.nih.gov/mesh/D058885
https://id.nlm.nih.gov/mesh/D015373
https://id.nlm.nih.gov/mesh/D016521
https://id.nlm.nih.gov/mesh/D014644
https://id.nlm.nih.gov/mesh/D012336
- Rights
- openAccess
- License
- https://creativecommons.org/licenses/by/4.0/
| id |
UDEA2_f071bcd32a451028047655fcfe284893 |
|---|---|
| oai_identifier_str |
oai:bibliotecadigital.udea.edu.co:10495/38752 |
| network_acronym_str |
UDEA2 |
| network_name_str |
Repositorio UdeA |
| repository_id_str |
|
| dc.title.spa.fl_str_mv |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| title |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| spellingShingle |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent Leptospirosis Leptospira Colombia Tipificación de Secuencias Multilocus Multilocus Sequence Typing Técnicas de Tipificación Bacteriana Bacterial Typing Techniques Electroforesis en Gel de Campo Pulsado Electrophoresis, Gel, Pulsed-Field Variación Genética Genetic Variation ARN Ribosómico 16S RNA, Ribosomal, 16S https://id.nlm.nih.gov/mesh/D007922 https://id.nlm.nih.gov/mesh/D007919 https://id.nlm.nih.gov/mesh/D003105 https://id.nlm.nih.gov/mesh/D058885 https://id.nlm.nih.gov/mesh/D015373 https://id.nlm.nih.gov/mesh/D016521 https://id.nlm.nih.gov/mesh/D014644 https://id.nlm.nih.gov/mesh/D012336 |
| title_short |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| title_full |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| title_fullStr |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| title_full_unstemmed |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| title_sort |
Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent |
| dc.creator.fl_str_mv |
López Quintero, Juan Álvaro Peláez Sánchez, Ronald Guillermo Pereira, Martha María Arboleda Naranjo, Margarita Agudelo Flórez, Piedad |
| dc.contributor.author.none.fl_str_mv |
López Quintero, Juan Álvaro Peláez Sánchez, Ronald Guillermo Pereira, Martha María Arboleda Naranjo, Margarita Agudelo Flórez, Piedad |
| dc.contributor.researchgroup.spa.fl_str_mv |
Inmunodeficiencias Primarias |
| dc.subject.decs.none.fl_str_mv |
Leptospirosis Leptospira Colombia Tipificación de Secuencias Multilocus Multilocus Sequence Typing Técnicas de Tipificación Bacteriana Bacterial Typing Techniques Electroforesis en Gel de Campo Pulsado Electrophoresis, Gel, Pulsed-Field Variación Genética Genetic Variation ARN Ribosómico 16S RNA, Ribosomal, 16S |
| topic |
Leptospirosis Leptospira Colombia Tipificación de Secuencias Multilocus Multilocus Sequence Typing Técnicas de Tipificación Bacteriana Bacterial Typing Techniques Electroforesis en Gel de Campo Pulsado Electrophoresis, Gel, Pulsed-Field Variación Genética Genetic Variation ARN Ribosómico 16S RNA, Ribosomal, 16S https://id.nlm.nih.gov/mesh/D007922 https://id.nlm.nih.gov/mesh/D007919 https://id.nlm.nih.gov/mesh/D003105 https://id.nlm.nih.gov/mesh/D058885 https://id.nlm.nih.gov/mesh/D015373 https://id.nlm.nih.gov/mesh/D016521 https://id.nlm.nih.gov/mesh/D014644 https://id.nlm.nih.gov/mesh/D012336 |
| dc.subject.meshuri.none.fl_str_mv |
https://id.nlm.nih.gov/mesh/D007922 https://id.nlm.nih.gov/mesh/D007919 https://id.nlm.nih.gov/mesh/D003105 https://id.nlm.nih.gov/mesh/D058885 https://id.nlm.nih.gov/mesh/D015373 https://id.nlm.nih.gov/mesh/D016521 https://id.nlm.nih.gov/mesh/D014644 https://id.nlm.nih.gov/mesh/D012336 |
| description |
ABSTRACT: The region of Antioquia in northeastern Colombia has the highest number of reported leptospirosis cases in the country. It also shows high seroprevalence indexes in the general population and socio-environmental conditions favourable for the transmission of the disease between humans and animals. In this study, 25 Leptospira isolates from Colombia’s Antioquia department were identified to the species level as L. santarosai (12), L. interrogans (9) and L. meyeri (4) using phylogenetic analysis of the Amidohydrolase gene. Typing at the serovar level was performed using multilocus sequence typing (MLST) and monoclonal antibodies. The serovars Canalzonae, Babudieri, Alice, Beye, and Copenhageni have been identified as causing human or animal infections in Antioquia, Colombia. The four environmental isolates were not identified to the serovar level. L. santarosai serovar Canalzonae and Alice were identified as new etiologic agents of human leptospirosis in Antioquia, Colombia. This paper reports species and serovars that were previously unknown in the region. |
| publishDate |
2016 |
| dc.date.issued.none.fl_str_mv |
2016 |
| dc.date.accessioned.none.fl_str_mv |
2024-03-26T02:14:38Z |
| dc.date.available.none.fl_str_mv |
2024-03-26T02:14:38Z |
| dc.type.spa.fl_str_mv |
Artículo de investigación |
| dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
| dc.type.coarversion.spa.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
| dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/article |
| dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| status_str |
publishedVersion |
| dc.identifier.citation.spa.fl_str_mv |
Peláez Sanchez RG, Lopez JÁ, Pereira MM, Arboleda Naranjo M, Agudelo-Flórez P. Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent. Mem Inst Oswaldo Cruz. 2016 Dec;111(12):737-744. doi: 10.1590/0074-02760160245. Epub 2016 Nov 10. PMID: 27982303; PMCID: PMC5146737. |
| dc.identifier.issn.none.fl_str_mv |
0074-0276 |
| dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/10495/38752 |
| dc.identifier.doi.none.fl_str_mv |
10.1590/0074-02760160245 |
| dc.identifier.eissn.none.fl_str_mv |
1678-8060 |
| identifier_str_mv |
Peláez Sanchez RG, Lopez JÁ, Pereira MM, Arboleda Naranjo M, Agudelo-Flórez P. Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent. Mem Inst Oswaldo Cruz. 2016 Dec;111(12):737-744. doi: 10.1590/0074-02760160245. Epub 2016 Nov 10. PMID: 27982303; PMCID: PMC5146737. 0074-0276 10.1590/0074-02760160245 1678-8060 |
| url |
https://hdl.handle.net/10495/38752 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Mem. Inst. Oswaldo Cruz. |
| dc.relation.citationendpage.spa.fl_str_mv |
744 |
| dc.relation.citationissue.spa.fl_str_mv |
12 |
| dc.relation.citationstartpage.spa.fl_str_mv |
737 |
| dc.relation.citationvolume.spa.fl_str_mv |
111 |
| dc.relation.ispartofjournal.spa.fl_str_mv |
Memórias do Instituto Oswaldo Cruz |
| dc.rights.uri.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
| dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by/2.5/co/ |
| dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
| dc.rights.coar.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
| rights_invalid_str_mv |
https://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/2.5/co/ http://purl.org/coar/access_right/c_abf2 |
| eu_rights_str_mv |
openAccess |
| dc.format.extent.spa.fl_str_mv |
8 páginas |
| dc.format.mimetype.spa.fl_str_mv |
application/pdf |
| dc.publisher.spa.fl_str_mv |
Instituto Oswaldo Cruz |
| dc.publisher.place.spa.fl_str_mv |
Río de Janeiro, Brasil |
| institution |
Universidad de Antioquia |
| bitstream.url.fl_str_mv |
https://bibliotecadigital.udea.edu.co/bitstreams/490bbcbc-3b1a-46bb-8861-263c937b7a1d/download https://bibliotecadigital.udea.edu.co/bitstreams/3ab20be0-6ff6-4146-bfd0-5f241677da88/download https://bibliotecadigital.udea.edu.co/bitstreams/ca836f56-52ba-4ff0-9dd3-d7aef8067f95/download https://bibliotecadigital.udea.edu.co/bitstreams/3eafe2e0-664c-4bda-b573-c36a7a3768b8/download https://bibliotecadigital.udea.edu.co/bitstreams/e1462e0e-e1c8-4251-b9ac-a91b8f9932a5/download |
| bitstream.checksum.fl_str_mv |
87323cc736f2c8f9f4ab665423927d1b 1646d1f6b96dbbbc38035efc9239ac9c 8a4605be74aa9ea9d79846c1fba20a33 f4bcf33a834fa2483c9b2b1ed92c3b39 16a35d0b04bc1305ac5616a0addf7ed9 |
| bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 MD5 |
| repository.name.fl_str_mv |
Repositorio Institucional de la Universidad de Antioquia |
| repository.mail.fl_str_mv |
aplicacionbibliotecadigitalbiblioteca@udea.edu.co |
| _version_ |
1851052531101204480 |
| spelling |
López Quintero, Juan ÁlvaroPeláez Sánchez, Ronald GuillermoPereira, Martha MaríaArboleda Naranjo, MargaritaAgudelo Flórez, PiedadInmunodeficiencias Primarias2024-03-26T02:14:38Z2024-03-26T02:14:38Z2016Peláez Sanchez RG, Lopez JÁ, Pereira MM, Arboleda Naranjo M, Agudelo-Flórez P. Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agent. Mem Inst Oswaldo Cruz. 2016 Dec;111(12):737-744. doi: 10.1590/0074-02760160245. Epub 2016 Nov 10. PMID: 27982303; PMCID: PMC5146737.0074-0276https://hdl.handle.net/10495/3875210.1590/0074-027601602451678-8060ABSTRACT: The region of Antioquia in northeastern Colombia has the highest number of reported leptospirosis cases in the country. It also shows high seroprevalence indexes in the general population and socio-environmental conditions favourable for the transmission of the disease between humans and animals. In this study, 25 Leptospira isolates from Colombia’s Antioquia department were identified to the species level as L. santarosai (12), L. interrogans (9) and L. meyeri (4) using phylogenetic analysis of the Amidohydrolase gene. Typing at the serovar level was performed using multilocus sequence typing (MLST) and monoclonal antibodies. The serovars Canalzonae, Babudieri, Alice, Beye, and Copenhageni have been identified as causing human or animal infections in Antioquia, Colombia. The four environmental isolates were not identified to the serovar level. L. santarosai serovar Canalzonae and Alice were identified as new etiologic agents of human leptospirosis in Antioquia, Colombia. This paper reports species and serovars that were previously unknown in the region.Colombia. Ministerio de Ciencia, Tecnología e Innovación - MincienciasCOL00124268 páginasapplication/pdfengInstituto Oswaldo CruzRío de Janeiro, Brasilhttps://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/2.5/co/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Genetic diversity of Leptospira in northwestern Colombia: first report of Leptospira santarosai as a recognised leptospirosis agentArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionLeptospirosisLeptospiraColombiaTipificación de Secuencias MultilocusMultilocus Sequence TypingTécnicas de Tipificación BacterianaBacterial Typing TechniquesElectroforesis en Gel de Campo PulsadoElectrophoresis, Gel, Pulsed-FieldVariación GenéticaGenetic VariationARN Ribosómico 16SRNA, Ribosomal, 16Shttps://id.nlm.nih.gov/mesh/D007922https://id.nlm.nih.gov/mesh/D007919https://id.nlm.nih.gov/mesh/D003105https://id.nlm.nih.gov/mesh/D058885https://id.nlm.nih.gov/mesh/D015373https://id.nlm.nih.gov/mesh/D016521https://id.nlm.nih.gov/mesh/D014644https://id.nlm.nih.gov/mesh/D012336Mem. Inst. Oswaldo Cruz.74412737111Memórias do Instituto Oswaldo Cruz122865740423111554531412RoR:03fd5ne08PublicationORIGINALLopezAlvaro_2016_Genetic_Leptospira_Colombia.pdfLopezAlvaro_2016_Genetic_Leptospira_Colombia.pdfArtículo de investigaciónapplication/pdf448916https://bibliotecadigital.udea.edu.co/bitstreams/490bbcbc-3b1a-46bb-8861-263c937b7a1d/download87323cc736f2c8f9f4ab665423927d1bMD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstreams/3ab20be0-6ff6-4146-bfd0-5f241677da88/download1646d1f6b96dbbbc38035efc9239ac9cMD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/ca836f56-52ba-4ff0-9dd3-d7aef8067f95/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTLopezAlvaro_2016_Genetic_Leptospira_Colombia.pdf.txtLopezAlvaro_2016_Genetic_Leptospira_Colombia.pdf.txtExtracted texttext/plain36408https://bibliotecadigital.udea.edu.co/bitstreams/3eafe2e0-664c-4bda-b573-c36a7a3768b8/downloadf4bcf33a834fa2483c9b2b1ed92c3b39MD54falseAnonymousREADTHUMBNAILLopezAlvaro_2016_Genetic_Leptospira_Colombia.pdf.jpgLopezAlvaro_2016_Genetic_Leptospira_Colombia.pdf.jpgGenerated Thumbnailimage/jpeg16328https://bibliotecadigital.udea.edu.co/bitstreams/e1462e0e-e1c8-4251-b9ac-a91b8f9932a5/download16a35d0b04bc1305ac5616a0addf7ed9MD55falseAnonymousREAD10495/38752oai:bibliotecadigital.udea.edu.co:10495/387522025-03-26 23:52:05.669https://creativecommons.org/licenses/by/4.0/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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 |
