Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis

ABSTRACT: Kunitz-type peptide expression has been described in the venom of snakes of the Viperidae, Elapidae and Colubridae families. This work aimed to identify these peptides in the venom gland transcriptome of the coral snake Micrurus mipartitus. Transcriptomic analysis revealed a high diversity...

Full description

Autores:
Rey Suárez, Jessica Paola
Nuñez Rangel, Vitelbina
Alzate Restrepo, Juan Fernando
Saldarriaga Córdoba, Mónica
Clavero León, Claudia
Avendaño Herrera, Ruben
Solano González, Stefany
Tipo de recurso:
Article of investigation
Fecha de publicación:
2024
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/41910
Acceso en línea:
https://hdl.handle.net/10495/41910
Palabra clave:
Secuencia de aminoácidos
Amino Acid Sequence
Simulación por Computador
Computer Simulation
Serpientes de Coral
Coral Snakes
Venenos Elapídicos
Elapid Venoms
Perfilación de la Expresión Génica
Gene Expression Profiling
Transcriptoma
Transcriptome
Serpientes Venenosas
Venomous Snakes
https://id.nlm.nih.gov/mesh/D000595
https://id.nlm.nih.gov/mesh/D003198
https://id.nlm.nih.gov/mesh/D000073181
https://id.nlm.nih.gov/mesh/D004546
https://id.nlm.nih.gov/mesh/D020869
https://id.nlm.nih.gov/mesh/D059467
https://id.nlm.nih.gov/mesh/D000097222
Rights
openAccess
License
https://creativecommons.org/licenses/by/4.0/
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repository_id_str
dc.title.spa.fl_str_mv Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
title Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
spellingShingle Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
Secuencia de aminoácidos
Amino Acid Sequence
Simulación por Computador
Computer Simulation
Serpientes de Coral
Coral Snakes
Venenos Elapídicos
Elapid Venoms
Perfilación de la Expresión Génica
Gene Expression Profiling
Transcriptoma
Transcriptome
Serpientes Venenosas
Venomous Snakes
https://id.nlm.nih.gov/mesh/D000595
https://id.nlm.nih.gov/mesh/D003198
https://id.nlm.nih.gov/mesh/D000073181
https://id.nlm.nih.gov/mesh/D004546
https://id.nlm.nih.gov/mesh/D020869
https://id.nlm.nih.gov/mesh/D059467
https://id.nlm.nih.gov/mesh/D000097222
title_short Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
title_full Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
title_fullStr Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
title_full_unstemmed Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
title_sort Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
dc.creator.fl_str_mv Rey Suárez, Jessica Paola
Nuñez Rangel, Vitelbina
Alzate Restrepo, Juan Fernando
Saldarriaga Córdoba, Mónica
Clavero León, Claudia
Avendaño Herrera, Ruben
Solano González, Stefany
dc.contributor.author.none.fl_str_mv Rey Suárez, Jessica Paola
Nuñez Rangel, Vitelbina
Alzate Restrepo, Juan Fernando
Saldarriaga Córdoba, Mónica
Clavero León, Claudia
Avendaño Herrera, Ruben
Solano González, Stefany
dc.contributor.researchgroup.spa.fl_str_mv Programa de Estudio y Control de Enfermedades Tropicales (PECET)
Toxinología, Alternativas Terapéuticas y Alimentarias
dc.subject.decs.none.fl_str_mv Secuencia de aminoácidos
Amino Acid Sequence
Simulación por Computador
Computer Simulation
Serpientes de Coral
Coral Snakes
Venenos Elapídicos
Elapid Venoms
Perfilación de la Expresión Génica
Gene Expression Profiling
Transcriptoma
Transcriptome
Serpientes Venenosas
Venomous Snakes
topic Secuencia de aminoácidos
Amino Acid Sequence
Simulación por Computador
Computer Simulation
Serpientes de Coral
Coral Snakes
Venenos Elapídicos
Elapid Venoms
Perfilación de la Expresión Génica
Gene Expression Profiling
Transcriptoma
Transcriptome
Serpientes Venenosas
Venomous Snakes
https://id.nlm.nih.gov/mesh/D000595
https://id.nlm.nih.gov/mesh/D003198
https://id.nlm.nih.gov/mesh/D000073181
https://id.nlm.nih.gov/mesh/D004546
https://id.nlm.nih.gov/mesh/D020869
https://id.nlm.nih.gov/mesh/D059467
https://id.nlm.nih.gov/mesh/D000097222
dc.subject.meshuri.none.fl_str_mv https://id.nlm.nih.gov/mesh/D000595
https://id.nlm.nih.gov/mesh/D003198
https://id.nlm.nih.gov/mesh/D000073181
https://id.nlm.nih.gov/mesh/D004546
https://id.nlm.nih.gov/mesh/D020869
https://id.nlm.nih.gov/mesh/D059467
https://id.nlm.nih.gov/mesh/D000097222
description ABSTRACT: Kunitz-type peptide expression has been described in the venom of snakes of the Viperidae, Elapidae and Colubridae families. This work aimed to identify these peptides in the venom gland transcriptome of the coral snake Micrurus mipartitus. Transcriptomic analysis revealed a high diversity of venom-associated Kunitz serine protease inhibitor proteins (KSPIs). A total of eight copies of KSPIs were predicted and grouped into four distinctive types, including short KSPI, long KSPI, Kunitz– Waprin (Ku-WAP) proteins, and a multi-domain Kunitz-type protein. From these, one short KSPI showed high identity with Micrurus tener and Austrelaps superbus. The long KSPI group exhibited similarity within the Micrurus genus and showed homology with various elapid snakes and even with the colubrid Pantherophis guttatus. A third group suggested the presence of Kunitz domains in addition to a whey-acidic-protein-type four-disulfide core domain. Finally, the fourth group corresponded to a transcript copy with a putative 511 amino acid protein, formerly annotated as KSPI, which UniProt classified as SPINT1. In conclusion, this study showed the diversity of Kunitz-type proteins expressed in the venom gland transcriptome of M. mipartitus.
publishDate 2024
dc.date.accessioned.none.fl_str_mv 2024-09-08T14:51:07Z
dc.date.available.none.fl_str_mv 2024-09-08T14:51:07Z
dc.date.issued.none.fl_str_mv 2024
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
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dc.identifier.citation.spa.fl_str_mv Saldarriaga-Córdoba M, Clavero-León C, Rey-Suarez P, Nuñez-Rangel V, Avendaño-Herrera R, Solano-González S, Alzate JF. Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis. Toxins (Basel). 2024 May 11;16(5):224. doi: 10.3390/toxins16050224.
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/41910
dc.identifier.doi.none.fl_str_mv 10.3390/toxins16050224
dc.identifier.eissn.none.fl_str_mv 2072-6651
identifier_str_mv Saldarriaga-Córdoba M, Clavero-León C, Rey-Suarez P, Nuñez-Rangel V, Avendaño-Herrera R, Solano-González S, Alzate JF. Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis. Toxins (Basel). 2024 May 11;16(5):224. doi: 10.3390/toxins16050224.
10.3390/toxins16050224
2072-6651
url https://hdl.handle.net/10495/41910
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Toxins
dc.relation.citationendpage.spa.fl_str_mv 16
dc.relation.citationissue.spa.fl_str_mv 5
dc.relation.citationstartpage.spa.fl_str_mv 1
dc.relation.citationvolume.spa.fl_str_mv 16
dc.relation.ispartofjournal.spa.fl_str_mv Toxins
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dc.format.extent.spa.fl_str_mv 16 páginas
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dc.publisher.place.spa.fl_str_mv Basilea, Suiza
institution Universidad de Antioquia
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spelling Rey Suárez, Jessica PaolaNuñez Rangel, VitelbinaAlzate Restrepo, Juan FernandoSaldarriaga Córdoba, MónicaClavero León, ClaudiaAvendaño Herrera, RubenSolano González, StefanyPrograma de Estudio y Control de Enfermedades Tropicales (PECET)Toxinología, Alternativas Terapéuticas y Alimentarias2024-09-08T14:51:07Z2024-09-08T14:51:07Z2024Saldarriaga-Córdoba M, Clavero-León C, Rey-Suarez P, Nuñez-Rangel V, Avendaño-Herrera R, Solano-González S, Alzate JF. Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis. Toxins (Basel). 2024 May 11;16(5):224. doi: 10.3390/toxins16050224.https://hdl.handle.net/10495/4191010.3390/toxins160502242072-6651ABSTRACT: Kunitz-type peptide expression has been described in the venom of snakes of the Viperidae, Elapidae and Colubridae families. This work aimed to identify these peptides in the venom gland transcriptome of the coral snake Micrurus mipartitus. Transcriptomic analysis revealed a high diversity of venom-associated Kunitz serine protease inhibitor proteins (KSPIs). A total of eight copies of KSPIs were predicted and grouped into four distinctive types, including short KSPI, long KSPI, Kunitz– Waprin (Ku-WAP) proteins, and a multi-domain Kunitz-type protein. From these, one short KSPI showed high identity with Micrurus tener and Austrelaps superbus. The long KSPI group exhibited similarity within the Micrurus genus and showed homology with various elapid snakes and even with the colubrid Pantherophis guttatus. A third group suggested the presence of Kunitz domains in addition to a whey-acidic-protein-type four-disulfide core domain. Finally, the fourth group corresponded to a transcript copy with a putative 511 amino acid protein, formerly annotated as KSPI, which UniProt classified as SPINT1. In conclusion, this study showed the diversity of Kunitz-type proteins expressed in the venom gland transcriptome of M. mipartitus.Agencia Nacional de Investigación y DesarrolloCOL0015099COL001447616 páginasapplication/pdfengMDPIBasilea, Suizahttps://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/2.5/co/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome AnalysisArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionSecuencia de aminoácidosAmino Acid SequenceSimulación por ComputadorComputer SimulationSerpientes de CoralCoral SnakesVenenos ElapídicosElapid VenomsPerfilación de la Expresión GénicaGene Expression ProfilingTranscriptomaTranscriptomeSerpientes VenenosasVenomous Snakeshttps://id.nlm.nih.gov/mesh/D000595https://id.nlm.nih.gov/mesh/D003198https://id.nlm.nih.gov/mesh/D000073181https://id.nlm.nih.gov/mesh/D004546https://id.nlm.nih.gov/mesh/D020869https://id.nlm.nih.gov/mesh/D059467https://id.nlm.nih.gov/mesh/D000097222Toxins165116ToxinsANID 1220921RoR:02ap3w078PublicationCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; 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