Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis

ABSTRACT The aim of this study was to evaluate genome size and ploidy of the dimorphic pathogenic fungus Paracoccidioides brasiliensis. The cell cycle analysis of 10 P. brasiliensis isolates by flow cytometry (FCM) revealed a genome size ranging from 26.3 ± 0.1 Mb (26.9 ± 0.1 fg) to 35.5 ± 0.2 Mb (3...

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Autores:
Almeida Ramalho, Agostinho Joao
Matute González, Daniel Ricardo
Carmona, Jenifer Andrea
Martins, Margarida
Torres Gómez, Isaura Patricia
McEwen Ochoa, Juan Guillermo
Restrepo Moreno, Ángela
Ludovico, Paula
Leão, Cecília
Rodrigues, Fernando José Santos
Tipo de recurso:
Article of investigation
Fecha de publicación:
2007
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/33467
Acceso en línea:
https://hdl.handle.net/10495/33467
Palabra clave:
Paracoccidioides
Genome Size
Tamaño del Genoma
Ploidies
Ploidias
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
id UDEA2_ed124a386f64126fcce2abc72b42ce4f
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/33467
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
title Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
spellingShingle Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
Paracoccidioides
Genome Size
Tamaño del Genoma
Ploidies
Ploidias
title_short Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
title_full Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
title_fullStr Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
title_full_unstemmed Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
title_sort Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence Analysis
dc.creator.fl_str_mv Almeida Ramalho, Agostinho Joao
Matute González, Daniel Ricardo
Carmona, Jenifer Andrea
Martins, Margarida
Torres Gómez, Isaura Patricia
McEwen Ochoa, Juan Guillermo
Restrepo Moreno, Ángela
Ludovico, Paula
Leão, Cecília
Rodrigues, Fernando José Santos
dc.contributor.author.none.fl_str_mv Almeida Ramalho, Agostinho Joao
Matute González, Daniel Ricardo
Carmona, Jenifer Andrea
Martins, Margarida
Torres Gómez, Isaura Patricia
McEwen Ochoa, Juan Guillermo
Restrepo Moreno, Ángela
Ludovico, Paula
Leão, Cecília
Rodrigues, Fernando José Santos
dc.contributor.researchgroup.spa.fl_str_mv Biología Celular y Molecular CIB U. de A. U. del Rosario
Micología Médica y Experimental
dc.subject.decs.none.fl_str_mv Paracoccidioides
Genome Size
Tamaño del Genoma
Ploidies
Ploidias
topic Paracoccidioides
Genome Size
Tamaño del Genoma
Ploidies
Ploidias
description ABSTRACT The aim of this study was to evaluate genome size and ploidy of the dimorphic pathogenic fungus Paracoccidioides brasiliensis. The cell cycle analysis of 10 P. brasiliensis isolates by flow cytometry (FCM) revealed a genome size ranging from 26.3 ± 0.1 Mb (26.9 ± 0.1 fg) to 35.5 ± 0.2 Mb (36.3 ± 0.2 fg) per uninucleated yeast cell. The DNA content of conidia from P. brasiliensis ATCC 60855—30.2 ± 0.8 Mb (30.9 ± 0.8 fg) —showed no significant differences with the yeast form, possibly excluding the occurrence of ploidy shift during morphogenesis. The ploidy of several P. brasiliensis isolates was assessed by comparing genome sizing by FCM with the previously described average haploid size obtained from electrophoretic karyotyping. The analysis of intra-individual variability of a highly polymorphic P. brasiliensis gene, GP43, indicated that only one allele seems to be present. Overall, the results showed that all analysed isolates presented a haploid, or at least aneuploid, DNA content and no association was detected between genome size/ploidy and the clinical-epidemiological features of the studied isolates. This work provides new knowledge on P. brasiliensis genetics/genomics, important for future research in basic cellular/molecular mechanisms and for the development/design of molecular techniques in this fungus.
publishDate 2007
dc.date.issued.none.fl_str_mv 2007
dc.date.accessioned.none.fl_str_mv 2023-02-13T16:50:53Z
dc.date.available.none.fl_str_mv 2023-02-13T16:50:53Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
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dc.identifier.issn.none.fl_str_mv 1087-1845
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/33467
dc.identifier.doi.none.fl_str_mv 10.1016/j.fgb.2006.06.003
dc.identifier.eissn.none.fl_str_mv 1096-0937
identifier_str_mv 1087-1845
10.1016/j.fgb.2006.06.003
1096-0937
url https://hdl.handle.net/10495/33467
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Fungal Genet. Biol.
dc.relation.citationendpage.spa.fl_str_mv 31
dc.relation.citationstartpage.spa.fl_str_mv 25
dc.relation.citationvolume.spa.fl_str_mv 44
dc.relation.ispartofjournal.spa.fl_str_mv Fungal Genetics and Biology
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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dc.format.extent.spa.fl_str_mv 7 páginas
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dc.publisher.spa.fl_str_mv Elsevier
Academic Press
dc.publisher.place.spa.fl_str_mv Orlando, Estados Unidos
institution Universidad de Antioquia
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spelling Almeida Ramalho, Agostinho JoaoMatute González, Daniel RicardoCarmona, Jenifer AndreaMartins, MargaridaTorres Gómez, Isaura PatriciaMcEwen Ochoa, Juan GuillermoRestrepo Moreno, ÁngelaLudovico, PaulaLeão, CecíliaRodrigues, Fernando José SantosBiología Celular y Molecular CIB U. de A. U. del RosarioMicología Médica y Experimental2023-02-13T16:50:53Z2023-02-13T16:50:53Z20071087-1845https://hdl.handle.net/10495/3346710.1016/j.fgb.2006.06.0031096-0937ABSTRACT The aim of this study was to evaluate genome size and ploidy of the dimorphic pathogenic fungus Paracoccidioides brasiliensis. The cell cycle analysis of 10 P. brasiliensis isolates by flow cytometry (FCM) revealed a genome size ranging from 26.3 ± 0.1 Mb (26.9 ± 0.1 fg) to 35.5 ± 0.2 Mb (36.3 ± 0.2 fg) per uninucleated yeast cell. The DNA content of conidia from P. brasiliensis ATCC 60855—30.2 ± 0.8 Mb (30.9 ± 0.8 fg) —showed no significant differences with the yeast form, possibly excluding the occurrence of ploidy shift during morphogenesis. The ploidy of several P. brasiliensis isolates was assessed by comparing genome sizing by FCM with the previously described average haploid size obtained from electrophoretic karyotyping. The analysis of intra-individual variability of a highly polymorphic P. brasiliensis gene, GP43, indicated that only one allele seems to be present. Overall, the results showed that all analysed isolates presented a haploid, or at least aneuploid, DNA content and no association was detected between genome size/ploidy and the clinical-epidemiological features of the studied isolates. This work provides new knowledge on P. brasiliensis genetics/genomics, important for future research in basic cellular/molecular mechanisms and for the development/design of molecular techniques in this fungus.COL0000962COL00137097 páginasapplication/pdfengElsevierAcademic PressOrlando, Estados Unidoshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Genome Size and Ploidy of Paracoccidioides Brasiliensis Reveals a Haploid DNA Content : Flow Cytometry and GP43 Sequence AnalysisArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionParacoccidioidesGenome SizeTamaño del GenomaPloidiesPloidiasFungal Genet. 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