Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds

ABSTRACT: The Nramp1 gene has been associated with natural resistance to intracellular microorganisms in several species including bovine. Recent evidence suggests an association between polymorphism in the 3 untranslated region (3 UTR) of this gene with resistance/susceptibility (R/S) to Brucella a...

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Autores:
González Sánchez, Jenny P.
Saldarriaga Carvajal, Omar Abdul
López Herrera, Albeiro
Bermúdez, Nelson R.
Zapata Builes, Wildeman
Ossa Londoño, Jorge Eliécer
Rugeles López, María Teresa
Bedoya Berrío, Gabriel de Jesús
Tipo de recurso:
Article of investigation
Fecha de publicación:
2006
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
spa
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/7775
Acceso en línea:
http://hdl.handle.net/10495/7775
Palabra clave:
Ganado criollo
Microsatélites (Genética)
Polimorfismo genético
Rights
openAccess
License
https://creativecommons.org/licenses/by-nc-sa/4.0/
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repository_id_str
dc.title.spa.fl_str_mv Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
dc.title.translated.spa.fl_str_mv Análisis de polimorfismos en el locus 1908STR1934 locus del 3 UTR del gen Nramp1 bovino en ocho razas de ganado
title Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
spellingShingle Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
Ganado criollo
Microsatélites (Genética)
Polimorfismo genético
title_short Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
title_full Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
title_fullStr Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
title_full_unstemmed Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
title_sort Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds
dc.creator.fl_str_mv González Sánchez, Jenny P.
Saldarriaga Carvajal, Omar Abdul
López Herrera, Albeiro
Bermúdez, Nelson R.
Zapata Builes, Wildeman
Ossa Londoño, Jorge Eliécer
Rugeles López, María Teresa
Bedoya Berrío, Gabriel de Jesús
dc.contributor.author.none.fl_str_mv González Sánchez, Jenny P.
Saldarriaga Carvajal, Omar Abdul
López Herrera, Albeiro
Bermúdez, Nelson R.
Zapata Builes, Wildeman
Ossa Londoño, Jorge Eliécer
Rugeles López, María Teresa
Bedoya Berrío, Gabriel de Jesús
dc.subject.none.fl_str_mv Ganado criollo
Microsatélites (Genética)
Polimorfismo genético
topic Ganado criollo
Microsatélites (Genética)
Polimorfismo genético
description ABSTRACT: The Nramp1 gene has been associated with natural resistance to intracellular microorganisms in several species including bovine. Recent evidence suggests an association between polymorphism in the 3 untranslated region (3 UTR) of this gene with resistance/susceptibility (R/S) to Brucella abortus as determined in vivo and in vitro. In this study we tested for the variability of the short tandem repeat (STR) within the 3 UTR of Nramp1 in six breeds of Colombian creole cattle (CCC) and compared the genotypes with those of Holstein and Brahman, which were recently introduced into this country. In CCC as well as in Holstein we found the allele 175 fixed in all populations. In Brahman, 175 allele was also present with a frequency of 0.467 but additionally, in this breed there appeared five other alleles and among them two previously unreported: 183 y 185; also was found the allele 189 in the Colombian creole Harton del Valle cattle, which is not previously reported. Together these results suggest that the 175 allele in the 3 UTR Nramp1 may be an ancestral allele in cattle and if this is true the association previously reported with the R/S trait requires further evaluation.
publishDate 2006
dc.date.issued.none.fl_str_mv 2006
dc.date.accessioned.none.fl_str_mv 2017-07-26T19:56:03Z
dc.date.available.none.fl_str_mv 2017-07-26T19:56:03Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
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dc.identifier.citation.spa.fl_str_mv González JP, Saldarriaga OA, López A, Bermúdez NR, Zapata W, Ossa JE, Rugeles MT, Bedoya G. Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds. Rev. Colomb. Cienc. Pecu. 2006;19(1):11–17.
dc.identifier.issn.none.fl_str_mv 0120-0690
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/7775
dc.identifier.eissn.none.fl_str_mv 2256-2958
identifier_str_mv González JP, Saldarriaga OA, López A, Bermúdez NR, Zapata W, Ossa JE, Rugeles MT, Bedoya G. Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds. Rev. Colomb. Cienc. Pecu. 2006;19(1):11–17.
0120-0690
2256-2958
url http://hdl.handle.net/10495/7775
dc.language.iso.spa.fl_str_mv spa
language spa
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Rev. Colomb. Cienc. Pecu.
dc.relation.citationendpage.spa.fl_str_mv 17
dc.relation.citationissue.spa.fl_str_mv 1
dc.relation.citationstartpage.spa.fl_str_mv 11
dc.relation.citationvolume.spa.fl_str_mv 19
dc.relation.ispartofjournal.spa.fl_str_mv Revista Colombiana de Ciencias Pecuarias
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dc.publisher.spa.fl_str_mv Universidad de Antioquia, Facultad de Ciencias Agrarias
dc.publisher.place.spa.fl_str_mv Medellín, Colombia
institution Universidad de Antioquia
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spelling González Sánchez, Jenny P.Saldarriaga Carvajal, Omar AbdulLópez Herrera, AlbeiroBermúdez, Nelson R.Zapata Builes, WildemanOssa Londoño, Jorge EliécerRugeles López, María TeresaBedoya Berrío, Gabriel de Jesús2017-07-26T19:56:03Z2017-07-26T19:56:03Z2006González JP, Saldarriaga OA, López A, Bermúdez NR, Zapata W, Ossa JE, Rugeles MT, Bedoya G. Polymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breeds. Rev. Colomb. Cienc. Pecu. 2006;19(1):11–17.0120-0690http://hdl.handle.net/10495/77752256-2958ABSTRACT: The Nramp1 gene has been associated with natural resistance to intracellular microorganisms in several species including bovine. Recent evidence suggests an association between polymorphism in the 3 untranslated region (3 UTR) of this gene with resistance/susceptibility (R/S) to Brucella abortus as determined in vivo and in vitro. In this study we tested for the variability of the short tandem repeat (STR) within the 3 UTR of Nramp1 in six breeds of Colombian creole cattle (CCC) and compared the genotypes with those of Holstein and Brahman, which were recently introduced into this country. In CCC as well as in Holstein we found the allele 175 fixed in all populations. In Brahman, 175 allele was also present with a frequency of 0.467 but additionally, in this breed there appeared five other alleles and among them two previously unreported: 183 y 185; also was found the allele 189 in the Colombian creole Harton del Valle cattle, which is not previously reported. Together these results suggest that the 175 allele in the 3 UTR Nramp1 may be an ancestral allele in cattle and if this is true the association previously reported with the R/S trait requires further evaluation.RESUMEN: El gen Nramp1 ha sido asociado con resistencia natural a microorganismos intracelulares en varias especies incluyendo bovinos. Evidencia reciente sugiere una asociación in vivo e in vitro, entre el polimorfismo en la región 3 no traducida (3 UTR del inglés 3 untranslated region) de este gen con resistencia susceptibilidad (R/S) a Brucella abortus. En este estudio se evaluó la variabilidad de una secuencia repetida en tandem (STR, del inglés short tandem repeat) dentro del 3 UTR de Nramp1 en seis razas de ganado criollo colombiano (GCC) y se comparó con la variabilidad de los de ese STR en Holstein y Brahman, razas que fueron recientemente introducidas a este país. En GCC así como en Holstein se encontró que el alelo 175 esta fijado en todas las poblaciones. En Brahman. El alelo 175 estuvo presente con una frecuencia de 0.467, pero adicionalmente en este ganado aparecieron otros 5 alelos, dos de ellos no habían sido previamente reportados: 183 y 185; también se encontró el alelo 189 en el ganado criollo colombiano Harton del Valle, el cual no está reportado previamente. Estos resultados sugieren que el alelo 175 en el 3 UTR de Nramp1 puede ser un alelo ancestral en ganado y si esto es cierto, la asociación previamente reportada con la característica de R/S requiere evaluación futura.application/pdfspaUniversidad de Antioquia, Facultad de Ciencias AgrariasMedellín, Colombiahttps://creativecommons.org/licenses/by-nc-sa/4.0/https://creativecommons.org/licenses/by-nc-sa/2.5/co/Atribución-NoComercial-CompartirIgual 2.5 Colombia (CC BY-NC-SA 2.5 CO)info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Ganado criolloMicrosatélites (Genética)Polimorfismo genéticoPolymorphism in 1908STR 1934 locus of the 3' UTR of the Nramp1 bovine gene in eight cattle breedsAnálisis de polimorfismos en el locus 1908STR1934 locus del 3 UTR del gen Nramp1 bovino en ocho razas de ganadoArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionRev. 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