Automatic recognition of anuran species based on syllable identification

ABSTRACT: Monitoring of biological populations is well known for being a complex task that involves high operational costs, unknown reproductive intervals of the studied species, and difficult visualization of isolated individuals (due to their mimetic and cryptic capabilities). Therefore, the devel...

Full description

Autores:
Bedoya Acevedo, Carol
Isaza Narváez, Claudia Victoria
Daza Rojas, Juan Manuel
López Hincapié, José David
Tipo de recurso:
Article of investigation
Fecha de publicación:
2014
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/41797
Acceso en línea:
https://hdl.handle.net/10495/41797
Palabra clave:
Bioacústica
Bioacoustics
Anfibio
Amphibians
Población biológica
Biological stocks
http://aims.fao.org/aos/agrovoc/c_359
http://aims.fao.org/aos/agrovoc/c_601eeee0
http://id.loc.gov/authorities/subjects/sh85014119
Rights
openAccess
License
https://creativecommons.org/licenses/by-nc-nd/4.0/
id UDEA2_ad1f80dfadf8010319b0112dbc761b25
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/41797
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Automatic recognition of anuran species based on syllable identification
title Automatic recognition of anuran species based on syllable identification
spellingShingle Automatic recognition of anuran species based on syllable identification
Bioacústica
Bioacoustics
Anfibio
Amphibians
Población biológica
Biological stocks
http://aims.fao.org/aos/agrovoc/c_359
http://aims.fao.org/aos/agrovoc/c_601eeee0
http://id.loc.gov/authorities/subjects/sh85014119
title_short Automatic recognition of anuran species based on syllable identification
title_full Automatic recognition of anuran species based on syllable identification
title_fullStr Automatic recognition of anuran species based on syllable identification
title_full_unstemmed Automatic recognition of anuran species based on syllable identification
title_sort Automatic recognition of anuran species based on syllable identification
dc.creator.fl_str_mv Bedoya Acevedo, Carol
Isaza Narváez, Claudia Victoria
Daza Rojas, Juan Manuel
López Hincapié, José David
dc.contributor.author.none.fl_str_mv Bedoya Acevedo, Carol
Isaza Narváez, Claudia Victoria
Daza Rojas, Juan Manuel
López Hincapié, José David
dc.contributor.researchgroup.spa.fl_str_mv Grupo Herpetológico de Antioquia
dc.subject.lcsh.none.fl_str_mv Bioacústica
Bioacoustics
topic Bioacústica
Bioacoustics
Anfibio
Amphibians
Población biológica
Biological stocks
http://aims.fao.org/aos/agrovoc/c_359
http://aims.fao.org/aos/agrovoc/c_601eeee0
http://id.loc.gov/authorities/subjects/sh85014119
dc.subject.agrovoc.none.fl_str_mv Anfibio
Amphibians
Población biológica
Biological stocks
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_359
http://aims.fao.org/aos/agrovoc/c_601eeee0
dc.subject.lcshuri.none.fl_str_mv http://id.loc.gov/authorities/subjects/sh85014119
description ABSTRACT: Monitoring of biological populations is well known for being a complex task that involves high operational costs, unknown reproductive intervals of the studied species, and difficult visualization of isolated individuals (due to their mimetic and cryptic capabilities). Therefore, the development of new methodologies able to measure quantities of individuals in specific biological populations without direct contact is desired. Species and individual recognition, based on acoustic analysis of their calls (Bioacoustics), is possible for many animals and has proven to be a useful tool in the study and monitoring of animal species. In this paper, an unsupervised methodology for anuran automatic identification is proposed; it is based on the use of a fuzzy classifier and Mel Frequency Cepstral Coefficients. This methodology is able to detect species not presented in the training stage, although they belong to different populations. Additionally, correlations among species of the same genus can be determined through the similarities of their calls. For testing the proposed method, two different datasets with species from the northeastern Colombia (Chocó and Antioquia departments with 103 and 813 mating calls respectively) were used. In validation tests performed, accuracies between 99.38% and 100% were achieved in all species by applying the proposed methodology to both datasets. Thirteen different species of anurans in both datasets were correctly identified.
publishDate 2014
dc.date.issued.none.fl_str_mv 2014
dc.date.accessioned.none.fl_str_mv 2024-09-05T04:40:33Z
dc.date.available.none.fl_str_mv 2024-09-05T04:40:33Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.issn.none.fl_str_mv 1574-9541
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/41797
dc.identifier.doi.none.fl_str_mv 10.1016/j.ecoinf.2014.08.009
dc.identifier.eissn.none.fl_str_mv 1878-0512
identifier_str_mv 1574-9541
10.1016/j.ecoinf.2014.08.009
1878-0512
url https://hdl.handle.net/10495/41797
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Ecol. Inform.
dc.relation.citationendpage.spa.fl_str_mv 209
dc.relation.citationstartpage.spa.fl_str_mv 200
dc.relation.citationvolume.spa.fl_str_mv 24
dc.relation.ispartofjournal.spa.fl_str_mv Ecological Informatics
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-nd/2.5/co/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc-nd/4.0/
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.extent.spa.fl_str_mv 10 páginas
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Elsevier
dc.publisher.place.spa.fl_str_mv Ámsterdam, Países Bajos
institution Universidad de Antioquia
bitstream.url.fl_str_mv https://bibliotecadigital.udea.edu.co/bitstreams/fefd5247-2b1c-42c6-a1ea-23c9f6e4313d/download
https://bibliotecadigital.udea.edu.co/bitstreams/bb25be7b-8525-469f-af11-7a1a402ca3dc/download
https://bibliotecadigital.udea.edu.co/bitstreams/081b4c42-8a1d-4f84-8d47-be0ee4ee2eab/download
https://bibliotecadigital.udea.edu.co/bitstreams/05b858fe-7b0b-497e-874a-3df49b897b36/download
https://bibliotecadigital.udea.edu.co/bitstreams/b629a2d3-54f8-49e7-982b-2f60d89daafe/download
bitstream.checksum.fl_str_mv 85e1cc55094bda5c0b5266cf5f364299
b88b088d9957e670ce3b3fbe2eedbc13
8a4605be74aa9ea9d79846c1fba20a33
8326dc0272760285928ac6bfa3d45acc
1b69f878c02af1731b7a3c0f90baf322
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional de la Universidad de Antioquia
repository.mail.fl_str_mv aplicacionbibliotecadigitalbiblioteca@udea.edu.co
_version_ 1851052649073344512
spelling Bedoya Acevedo, CarolIsaza Narváez, Claudia VictoriaDaza Rojas, Juan ManuelLópez Hincapié, José DavidGrupo Herpetológico de Antioquia2024-09-05T04:40:33Z2024-09-05T04:40:33Z20141574-9541https://hdl.handle.net/10495/4179710.1016/j.ecoinf.2014.08.0091878-0512ABSTRACT: Monitoring of biological populations is well known for being a complex task that involves high operational costs, unknown reproductive intervals of the studied species, and difficult visualization of isolated individuals (due to their mimetic and cryptic capabilities). Therefore, the development of new methodologies able to measure quantities of individuals in specific biological populations without direct contact is desired. Species and individual recognition, based on acoustic analysis of their calls (Bioacoustics), is possible for many animals and has proven to be a useful tool in the study and monitoring of animal species. In this paper, an unsupervised methodology for anuran automatic identification is proposed; it is based on the use of a fuzzy classifier and Mel Frequency Cepstral Coefficients. This methodology is able to detect species not presented in the training stage, although they belong to different populations. Additionally, correlations among species of the same genus can be determined through the similarities of their calls. For testing the proposed method, two different datasets with species from the northeastern Colombia (Chocó and Antioquia departments with 103 and 813 mating calls respectively) were used. In validation tests performed, accuracies between 99.38% and 100% were achieved in all species by applying the proposed methodology to both datasets. Thirteen different species of anurans in both datasets were correctly identified.Universidad de Antioquia. Vicerrectoría de investigación. Comité para el Desarrollo de la Investigación - CODICOL000737310 páginasapplication/pdfengElsevierÁmsterdam, Países Bajoshttps://creativecommons.org/licenses/by-nc-nd/4.0/http://creativecommons.org/licenses/by-nc-nd/2.5/co/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2BioacústicaBioacousticsAnfibioAmphibiansPoblación biológicaBiological stockshttp://aims.fao.org/aos/agrovoc/c_359http://aims.fao.org/aos/agrovoc/c_601eeee0http://id.loc.gov/authorities/subjects/sh85014119Automatic recognition of anuran species based on syllable identificationArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionEcol. Inform.20920024Ecological InformaticsDetección Automática de Cantos de Ranas a partir de sus Llamados de AdvertenciaCODI PRG13-2-02Estrategia de sostenibilidad 2014-2015RoR:03bp5hc83PublicationORIGINALBedoyaCarol_2014_AutomaticRecognitionAnuranSpecies.pdfBedoyaCarol_2014_AutomaticRecognitionAnuranSpecies.pdfArtículo de investigaciónapplication/pdf1812097https://bibliotecadigital.udea.edu.co/bitstreams/fefd5247-2b1c-42c6-a1ea-23c9f6e4313d/download85e1cc55094bda5c0b5266cf5f364299MD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstreams/bb25be7b-8525-469f-af11-7a1a402ca3dc/downloadb88b088d9957e670ce3b3fbe2eedbc13MD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/081b4c42-8a1d-4f84-8d47-be0ee4ee2eab/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTBedoyaCarol_2014_AutomaticRecognitionAnuranSpecies.pdf.txtBedoyaCarol_2014_AutomaticRecognitionAnuranSpecies.pdf.txtExtracted texttext/plain61018https://bibliotecadigital.udea.edu.co/bitstreams/05b858fe-7b0b-497e-874a-3df49b897b36/download8326dc0272760285928ac6bfa3d45accMD54falseAnonymousREADTHUMBNAILBedoyaCarol_2014_AutomaticRecognitionAnuranSpecies.pdf.jpgBedoyaCarol_2014_AutomaticRecognitionAnuranSpecies.pdf.jpgGenerated Thumbnailimage/jpeg15113https://bibliotecadigital.udea.edu.co/bitstreams/b629a2d3-54f8-49e7-982b-2f60d89daafe/download1b69f878c02af1731b7a3c0f90baf322MD55falseAnonymousREAD10495/41797oai:bibliotecadigital.udea.edu.co:10495/417972025-03-27 01:38:09.558https://creativecommons.org/licenses/by-nc-nd/4.0/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.coTk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo=