Geographic Patterns of Genome Admixture in Latin American Mestizos

ABSTRACT: The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis...

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Autores:
Wang, Sijia
Ray, Nicolas
Rojas Montoya, Winston
Parra Marín, María Victoria
Bedoya Berrío, Gabriel de Jesús
Gallo, Carla
Poletti, Giovanni
Mazzotti, Guido
Hurtado, Ana
Hill, Kim
Camrena, Beatriz
Nicolini, Humberto
Klitz, William
Barrantes, Ramiro
Molina, Julio
Freimer, Nelson
Bortolini, Maria Cátira
Salzano, Francisco
Petzl-Erler, Maria
Tsuneto, Luiza
Dipierri, José
Alfaro, Emma
Bailliet, Graciela
Bianchi, Nestor
Llop, Elena
Rothhammer, Francisco
Excoffier, Laurent
Ruiz Linares, Andrés
Tipo de recurso:
Article of investigation
Fecha de publicación:
2008
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/23697
Acceso en línea:
http://hdl.handle.net/10495/23697
Palabra clave:
Genética de población
Genetics, Population
Cromosoma X
X Chromosome
Mestizos de América del Sur
Indians of south america-mixed bloods
Grupo étnico
Ethnic groups
http://aims.fao.org/aos/agrovoc/c_2678
https://id.nlm.nih.gov/mesh/D005828
https://id.nlm.nih.gov/mesh/D014960
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
id UDEA2_a5564ca08b43b671334bb7ee04106c7e
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/23697
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Geographic Patterns of Genome Admixture in Latin American Mestizos
title Geographic Patterns of Genome Admixture in Latin American Mestizos
spellingShingle Geographic Patterns of Genome Admixture in Latin American Mestizos
Genética de población
Genetics, Population
Cromosoma X
X Chromosome
Mestizos de América del Sur
Indians of south america-mixed bloods
Grupo étnico
Ethnic groups
http://aims.fao.org/aos/agrovoc/c_2678
https://id.nlm.nih.gov/mesh/D005828
https://id.nlm.nih.gov/mesh/D014960
title_short Geographic Patterns of Genome Admixture in Latin American Mestizos
title_full Geographic Patterns of Genome Admixture in Latin American Mestizos
title_fullStr Geographic Patterns of Genome Admixture in Latin American Mestizos
title_full_unstemmed Geographic Patterns of Genome Admixture in Latin American Mestizos
title_sort Geographic Patterns of Genome Admixture in Latin American Mestizos
dc.creator.fl_str_mv Wang, Sijia
Ray, Nicolas
Rojas Montoya, Winston
Parra Marín, María Victoria
Bedoya Berrío, Gabriel de Jesús
Gallo, Carla
Poletti, Giovanni
Mazzotti, Guido
Hurtado, Ana
Hill, Kim
Camrena, Beatriz
Nicolini, Humberto
Klitz, William
Barrantes, Ramiro
Molina, Julio
Freimer, Nelson
Bortolini, Maria Cátira
Salzano, Francisco
Petzl-Erler, Maria
Tsuneto, Luiza
Dipierri, José
Alfaro, Emma
Bailliet, Graciela
Bianchi, Nestor
Llop, Elena
Rothhammer, Francisco
Excoffier, Laurent
Ruiz Linares, Andrés
dc.contributor.author.none.fl_str_mv Wang, Sijia
Ray, Nicolas
Rojas Montoya, Winston
Parra Marín, María Victoria
Bedoya Berrío, Gabriel de Jesús
Gallo, Carla
Poletti, Giovanni
Mazzotti, Guido
Hurtado, Ana
Hill, Kim
Camrena, Beatriz
Nicolini, Humberto
Klitz, William
Barrantes, Ramiro
Molina, Julio
Freimer, Nelson
Bortolini, Maria Cátira
Salzano, Francisco
Petzl-Erler, Maria
Tsuneto, Luiza
Dipierri, José
Alfaro, Emma
Bailliet, Graciela
Bianchi, Nestor
Llop, Elena
Rothhammer, Francisco
Excoffier, Laurent
Ruiz Linares, Andrés
dc.contributor.researchgroup.spa.fl_str_mv Genética Molecular (GENMOL)
dc.subject.decs.none.fl_str_mv Genética de población
Genetics, Population
Cromosoma X
X Chromosome
topic Genética de población
Genetics, Population
Cromosoma X
X Chromosome
Mestizos de América del Sur
Indians of south america-mixed bloods
Grupo étnico
Ethnic groups
http://aims.fao.org/aos/agrovoc/c_2678
https://id.nlm.nih.gov/mesh/D005828
https://id.nlm.nih.gov/mesh/D014960
dc.subject.lemb.none.fl_str_mv Mestizos de América del Sur
Indians of south america-mixed bloods
dc.subject.agrovoc.none.fl_str_mv Grupo étnico
Ethnic groups
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_2678
dc.subject.meshuri.none.fl_str_mv https://id.nlm.nih.gov/mesh/D005828
https://id.nlm.nih.gov/mesh/D014960
description ABSTRACT: The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis of admixture in thirteen Mestizo populations (i.e. in regions of mainly European and Native settlement) from seven countries in Latin America based on data for 678 autosomal and 29 Xchromosome microsatellites. We found extensive variation in Native American and European ancestry (and generally low levels of African ancestry) among populations and individuals, and evidence that admixture across Latin America has often involved predominantly European men and both Native and African women. An admixture analysis allowing for Native American population subdivision revealed a differentiation of the Native American ancestry amongst Mestizos. This observation is consistent with the genetic structure of pre-Columbian populations and with admixture having involved Natives from the area where the Mestizo examined are located. Our findings agree with available information on the demographic history of Latin America and have a number of implications for the design of association studies in population from the region.
publishDate 2008
dc.date.issued.none.fl_str_mv 2008
dc.date.accessioned.none.fl_str_mv 2021-11-02T17:32:09Z
dc.date.available.none.fl_str_mv 2021-11-02T17:32:09Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
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dc.identifier.citation.spa.fl_str_mv Wang S, Ray N, Rojas W, Parra MV, Bedoya G, et al. (2008) Geographic Patterns of Genome Admixture in Latin American Mestizos. PLoS Genet 4(3): e1000037. doi:10.1371/journal.pgen.1000037
dc.identifier.issn.none.fl_str_mv 1553-7390
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/23697
dc.identifier.doi.none.fl_str_mv 10.1371/journal.pgen.1000037
dc.identifier.eissn.none.fl_str_mv 1553-7404
identifier_str_mv Wang S, Ray N, Rojas W, Parra MV, Bedoya G, et al. (2008) Geographic Patterns of Genome Admixture in Latin American Mestizos. PLoS Genet 4(3): e1000037. doi:10.1371/journal.pgen.1000037
1553-7390
10.1371/journal.pgen.1000037
1553-7404
url http://hdl.handle.net/10495/23697
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv PLoS Genet.
dc.relation.citationendpage.spa.fl_str_mv 9
dc.relation.citationissue.spa.fl_str_mv 3
dc.relation.citationstartpage.spa.fl_str_mv 1
dc.relation.citationvolume.spa.fl_str_mv 4
dc.relation.ispartofjournal.spa.fl_str_mv PLoS Genetics
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dc.publisher.spa.fl_str_mv Public Library of Science
dc.publisher.place.spa.fl_str_mv San Francisco, Estados Unidos
institution Universidad de Antioquia
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spelling Wang, SijiaRay, NicolasRojas Montoya, WinstonParra Marín, María VictoriaBedoya Berrío, Gabriel de JesúsGallo, CarlaPoletti, GiovanniMazzotti, GuidoHurtado, AnaHill, KimCamrena, BeatrizNicolini, HumbertoKlitz, WilliamBarrantes, RamiroMolina, JulioFreimer, NelsonBortolini, Maria CátiraSalzano, FranciscoPetzl-Erler, MariaTsuneto, LuizaDipierri, JoséAlfaro, EmmaBailliet, GracielaBianchi, NestorLlop, ElenaRothhammer, FranciscoExcoffier, LaurentRuiz Linares, AndrésGenética Molecular (GENMOL)2021-11-02T17:32:09Z2021-11-02T17:32:09Z2008Wang S, Ray N, Rojas W, Parra MV, Bedoya G, et al. (2008) Geographic Patterns of Genome Admixture in Latin American Mestizos. PLoS Genet 4(3): e1000037. doi:10.1371/journal.pgen.10000371553-7390http://hdl.handle.net/10495/2369710.1371/journal.pgen.10000371553-7404ABSTRACT: The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis of admixture in thirteen Mestizo populations (i.e. in regions of mainly European and Native settlement) from seven countries in Latin America based on data for 678 autosomal and 29 Xchromosome microsatellites. We found extensive variation in Native American and European ancestry (and generally low levels of African ancestry) among populations and individuals, and evidence that admixture across Latin America has often involved predominantly European men and both Native and African women. An admixture analysis allowing for Native American population subdivision revealed a differentiation of the Native American ancestry amongst Mestizos. This observation is consistent with the genetic structure of pre-Columbian populations and with admixture having involved Natives from the area where the Mestizo examined are located. Our findings agree with available information on the demographic history of Latin America and have a number of implications for the design of association studies in population from the region.COL00067239application/pdfengPublic Library of ScienceSan Francisco, Estados Unidoshttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Geographic Patterns of Genome Admixture in Latin American MestizosArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionGenética de poblaciónGenetics, PopulationCromosoma XX ChromosomeMestizos de América del SurIndians of south america-mixed bloodsGrupo étnicoEthnic groupshttp://aims.fao.org/aos/agrovoc/c_2678https://id.nlm.nih.gov/mesh/D005828https://id.nlm.nih.gov/mesh/D014960PLoS Genet.9314PLoS GeneticsPublicationORIGINALRojasWinston_2008_GenomeAdmixtureMestizos.pdfRojasWinston_2008_GenomeAdmixtureMestizos.pdfArtículo de investigaciónapplication/pdf454817https://bibliotecadigital.udea.edu.co/bitstreams/6e6ec520-60d9-48de-8df5-24adfc5c13c6/download6ba663e3b153c3801e5d5e792dd91b68MD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstreams/7d91dab5-1246-45ff-83cd-b2c8f24e9016/download1646d1f6b96dbbbc38035efc9239ac9cMD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/cc8c3e2c-da1f-43be-a0c8-a87d0abb999e/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTRojasWinston_2008_GenomeAdmixtureMestizos.pdf.txtRojasWinston_2008_GenomeAdmixtureMestizos.pdf.txtExtracted texttext/plain45658https://bibliotecadigital.udea.edu.co/bitstreams/9b20e1cf-2c3d-42bb-aeb8-9a1081c80a96/download69634b4d75c11f85bbebe20247e869b2MD54falseAnonymousREADTHUMBNAILRojasWinston_2008_GenomeAdmixtureMestizos.pdf.jpgRojasWinston_2008_GenomeAdmixtureMestizos.pdf.jpgGenerated Thumbnailimage/jpeg18160https://bibliotecadigital.udea.edu.co/bitstreams/b3728004-6141-449f-a0e1-444b0a300c87/download93c2c11d998ff4be3c2e791891a3cc03MD55falseAnonymousREAD10495/23697oai:bibliotecadigital.udea.edu.co:10495/236972025-03-27 01:42:55.278http://creativecommons.org/licenses/by/2.5/co/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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