Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis
ABSTRACT: Background: Embryonic genome activation (EGA) is a critical event for the preimplantation embryo, which is manifested by changes in chromatin structure, transcriptional machinery, expression of embryonic genes, and degradation of maternal transcripts. The objectives of this study were to d...
- Autores:
-
Rodríguez Osorio, Nélida
Uzun, Alper
Kaya, Abdullah
Wang, Hongfeng
Parrish, John J.
Ilyin, Valentin A.
Memili, Erdogan
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2009
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/33392
- Acceso en línea:
- https://hdl.handle.net/10495/33392
- Palabra clave:
- Genómica
Genomics
Blastocisto
Blastocyst
Bovinos
Cattle
Secuencia de Aminoácidos
Amino Acid Sequence
Desarrollo Embrionario
Embryonic Development
Ensamble y Desensamble de Cromatina
Chromatin Assembly and Disassembly
Regulación del Desarrollo de la Expresión Génica
Gene Expression Regulation, Developmental
Oocitos
Oocytes
Filogenia
Phylogeny
Modelos Moleculares
Models, Molecular
Proteínas HMGN
HMGN Proteins
ADN Helicasas
DNA Helicases
- Rights
- openAccess
- License
- https://creativecommons.org/licenses/by/4.0/
| id |
UDEA2_a3dd2f09fb116003943355a2d540217d |
|---|---|
| oai_identifier_str |
oai:bibliotecadigital.udea.edu.co:10495/33392 |
| network_acronym_str |
UDEA2 |
| network_name_str |
Repositorio UdeA |
| repository_id_str |
|
| dc.title.spa.fl_str_mv |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| title |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| spellingShingle |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis Genómica Genomics Blastocisto Blastocyst Bovinos Cattle Secuencia de Aminoácidos Amino Acid Sequence Desarrollo Embrionario Embryonic Development Ensamble y Desensamble de Cromatina Chromatin Assembly and Disassembly Regulación del Desarrollo de la Expresión Génica Gene Expression Regulation, Developmental Oocitos Oocytes Filogenia Phylogeny Modelos Moleculares Models, Molecular Proteínas HMGN HMGN Proteins ADN Helicasas DNA Helicases |
| title_short |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| title_full |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| title_fullStr |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| title_full_unstemmed |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| title_sort |
Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis |
| dc.creator.fl_str_mv |
Rodríguez Osorio, Nélida Uzun, Alper Kaya, Abdullah Wang, Hongfeng Parrish, John J. Ilyin, Valentin A. Memili, Erdogan |
| dc.contributor.author.none.fl_str_mv |
Rodríguez Osorio, Nélida Uzun, Alper Kaya, Abdullah Wang, Hongfeng Parrish, John J. Ilyin, Valentin A. Memili, Erdogan |
| dc.contributor.researchgroup.spa.fl_str_mv |
CENTAURO |
| dc.subject.decs.none.fl_str_mv |
Genómica Genomics Blastocisto Blastocyst Bovinos Cattle Secuencia de Aminoácidos Amino Acid Sequence Desarrollo Embrionario Embryonic Development Ensamble y Desensamble de Cromatina Chromatin Assembly and Disassembly Regulación del Desarrollo de la Expresión Génica Gene Expression Regulation, Developmental Oocitos Oocytes Filogenia Phylogeny Modelos Moleculares Models, Molecular Proteínas HMGN HMGN Proteins ADN Helicasas DNA Helicases |
| topic |
Genómica Genomics Blastocisto Blastocyst Bovinos Cattle Secuencia de Aminoácidos Amino Acid Sequence Desarrollo Embrionario Embryonic Development Ensamble y Desensamble de Cromatina Chromatin Assembly and Disassembly Regulación del Desarrollo de la Expresión Génica Gene Expression Regulation, Developmental Oocitos Oocytes Filogenia Phylogeny Modelos Moleculares Models, Molecular Proteínas HMGN HMGN Proteins ADN Helicasas DNA Helicases |
| description |
ABSTRACT: Background: Embryonic genome activation (EGA) is a critical event for the preimplantation embryo, which is manifested by changes in chromatin structure, transcriptional machinery, expression of embryonic genes, and degradation of maternal transcripts. The objectives of this study were to determine transcript abundance of HMGN3a and SMARCAL1 in mature bovine oocytes and early bovine embryos, to perform comparative functional genomics analysis of these genes across mammals. |
| publishDate |
2009 |
| dc.date.issued.none.fl_str_mv |
2009 |
| dc.date.accessioned.none.fl_str_mv |
2023-02-07T03:15:38Z |
| dc.date.available.none.fl_str_mv |
2023-02-07T03:15:38Z |
| dc.type.spa.fl_str_mv |
Artículo de investigación |
| dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
| dc.type.coarversion.spa.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
| dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/article |
| dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| status_str |
publishedVersion |
| dc.identifier.citation.spa.fl_str_mv |
Uzun A, Rodríguez-Osorio N, Kaya A, Wang H, Parrish JJ, Ilyin VA, Memili E. Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis. BMC Genomics. 2009 Apr 24;10:183. doi: 10.1186/1471-2164-10-183. |
| dc.identifier.uri.none.fl_str_mv |
https://hdl.handle.net/10495/33392 |
| dc.identifier.doi.none.fl_str_mv |
10.1186/1471-2164-10-183 |
| dc.identifier.eissn.none.fl_str_mv |
1471-2164 |
| identifier_str_mv |
Uzun A, Rodríguez-Osorio N, Kaya A, Wang H, Parrish JJ, Ilyin VA, Memili E. Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis. BMC Genomics. 2009 Apr 24;10:183. doi: 10.1186/1471-2164-10-183. 10.1186/1471-2164-10-183 1471-2164 |
| url |
https://hdl.handle.net/10495/33392 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
BMC Genomics. |
| dc.relation.citationendpage.spa.fl_str_mv |
190 |
| dc.relation.citationstartpage.spa.fl_str_mv |
183 |
| dc.relation.citationvolume.spa.fl_str_mv |
10 |
| dc.relation.ispartofjournal.spa.fl_str_mv |
BMC Genomics |
| dc.rights.uri.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
| dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by-nc-sa/2.5/co/ |
| dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
| dc.rights.coar.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
| rights_invalid_str_mv |
https://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by-nc-sa/2.5/co/ http://purl.org/coar/access_right/c_abf2 |
| eu_rights_str_mv |
openAccess |
| dc.format.extent.spa.fl_str_mv |
7 |
| dc.format.mimetype.spa.fl_str_mv |
application/pdf |
| dc.publisher.spa.fl_str_mv |
BMC |
| dc.publisher.place.spa.fl_str_mv |
Londres, Inglaterra |
| institution |
Universidad de Antioquia |
| bitstream.url.fl_str_mv |
https://bibliotecadigital.udea.edu.co/bitstreams/4468a706-ae5a-4990-9570-42045d2488a4/download https://bibliotecadigital.udea.edu.co/bitstreams/6e121bdf-2530-45d1-8126-24d8184b6465/download https://bibliotecadigital.udea.edu.co/bitstreams/526983b4-5358-4987-b824-d0ec1f832b56/download https://bibliotecadigital.udea.edu.co/bitstreams/d873fc7f-4766-42d0-92f2-8774cf86bc24/download https://bibliotecadigital.udea.edu.co/bitstreams/3a2b0c8c-12c3-4e81-810e-9fcc133b3e6a/download |
| bitstream.checksum.fl_str_mv |
82976c725921de41dcc3de8a9c37b3af e2060682c9c70d4d30c83c51448f4eed 8a4605be74aa9ea9d79846c1fba20a33 27541550f017305c63f12b7ed07e0995 6d892569572eb23077848d2ff2a9ea24 |
| bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 MD5 |
| repository.name.fl_str_mv |
Repositorio Institucional de la Universidad de Antioquia |
| repository.mail.fl_str_mv |
aplicacionbibliotecadigitalbiblioteca@udea.edu.co |
| _version_ |
1851052451322396672 |
| spelling |
Rodríguez Osorio, NélidaUzun, AlperKaya, AbdullahWang, HongfengParrish, John J.Ilyin, Valentin A.Memili, ErdoganCENTAURO2023-02-07T03:15:38Z2023-02-07T03:15:38Z2009Uzun A, Rodríguez-Osorio N, Kaya A, Wang H, Parrish JJ, Ilyin VA, Memili E. Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis. BMC Genomics. 2009 Apr 24;10:183. doi: 10.1186/1471-2164-10-183.https://hdl.handle.net/10495/3339210.1186/1471-2164-10-1831471-2164ABSTRACT: Background: Embryonic genome activation (EGA) is a critical event for the preimplantation embryo, which is manifested by changes in chromatin structure, transcriptional machinery, expression of embryonic genes, and degradation of maternal transcripts. The objectives of this study were to determine transcript abundance of HMGN3a and SMARCAL1 in mature bovine oocytes and early bovine embryos, to perform comparative functional genomics analysis of these genes across mammals.COL00012627application/pdfengBMCLondres, Inglaterrahttps://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by-nc-sa/2.5/co/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesisArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionGenómicaGenomicsBlastocistoBlastocystBovinosCattleSecuencia de AminoácidosAmino Acid SequenceDesarrollo EmbrionarioEmbryonic DevelopmentEnsamble y Desensamble de CromatinaChromatin Assembly and DisassemblyRegulación del Desarrollo de la Expresión GénicaGene Expression Regulation, DevelopmentalOocitosOocytesFilogeniaPhylogenyModelos MolecularesModels, MolecularProteínas HMGNHMGN ProteinsADN HelicasasDNA HelicasesBMC Genomics.19018310BMC GenomicsPublicationORIGINALRodriguezNelida_2009_FunctionalGenomicsHMGN3a.pdfRodriguezNelida_2009_FunctionalGenomicsHMGN3a.pdfArtículo de investigaciónapplication/pdf8817501https://bibliotecadigital.udea.edu.co/bitstreams/4468a706-ae5a-4990-9570-42045d2488a4/download82976c725921de41dcc3de8a9c37b3afMD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-81051https://bibliotecadigital.udea.edu.co/bitstreams/6e121bdf-2530-45d1-8126-24d8184b6465/downloade2060682c9c70d4d30c83c51448f4eedMD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/526983b4-5358-4987-b824-d0ec1f832b56/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTRodriguezNelida_2009_FunctionalGenomicsHMGN3a.pdf.txtRodriguezNelida_2009_FunctionalGenomicsHMGN3a.pdf.txtExtracted texttext/plain70466https://bibliotecadigital.udea.edu.co/bitstreams/d873fc7f-4766-42d0-92f2-8774cf86bc24/download27541550f017305c63f12b7ed07e0995MD54falseAnonymousREADTHUMBNAILRodriguezNelida_2009_FunctionalGenomicsHMGN3a.pdf.jpgRodriguezNelida_2009_FunctionalGenomicsHMGN3a.pdf.jpgGenerated Thumbnailimage/jpeg14349https://bibliotecadigital.udea.edu.co/bitstreams/3a2b0c8c-12c3-4e81-810e-9fcc133b3e6a/download6d892569572eb23077848d2ff2a9ea24MD55falseAnonymousREAD10495/33392oai:bibliotecadigital.udea.edu.co:10495/333922025-03-26 22:33:25.194https://creativecommons.org/licenses/by/4.0/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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 |
