Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia

ABSTRACT: The objective of the study was to evaluate the frequency and genetic characteristics of ESBL-producing Escherichia coli and Klebsiella spp. and the risk factors associated with a high total bacterial count in bulk tank milk samples of dairy farms in three municipalities of the Antioquia De...

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Autores:
Ágredo Campos, Ángela Sofía
Fernández Silva, Jorge Arturo
Ramírez Vásquez, Nicolás Fernando
Akineden, Ömer
Tipo de recurso:
Article of investigation
Fecha de publicación:
2024
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/42373
Acceso en línea:
https://hdl.handle.net/10495/42373
Palabra clave:
Antibacterianos
Anti-Bacterial Agents
Colombia
Infecciones por Klebsiella
Klebsiella Infections
Klebsiella pneumoniae
Pruebas de Sensibilidad Microbiana
Microbial Sensitivity Tests
Leche - microbiología
Milk - microbiology
beta-Lactamasas
beta-Lactamases
Tanques de leche
Milk tanks
Conteo bacteriano
Bacterial counting
Resistencia a los antimicrobianos
Antimicrobial resistance
Ganado bovino
Cattle
Ganadería lechera
Dairying
Escherichia coli
Explotaciones agrarias
Farms
http://aims.fao.org/aos/agrovoc/c_25810
http://aims.fao.org/aos/agrovoc/c_16691
http://aims.fao.org/aos/agrovoc/c_662faf6f
http://aims.fao.org/aos/agrovoc/c_1391
http://aims.fao.org/aos/agrovoc/c_10274
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_2809
https://id.nlm.nih.gov/mesh/D000900
https://id.nlm.nih.gov/mesh/D003105
https://id.nlm.nih.gov/mesh/D007710
https://id.nlm.nih.gov/mesh/D007711
https://id.nlm.nih.gov/mesh/D008826
https://id.nlm.nih.gov/mesh/D008892
https://id.nlm.nih.gov/mesh/D001618
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
id UDEA2_a1d3ad4406fda18c0eea9c4bdefdfdb7
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/42373
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
title Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
spellingShingle Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
Antibacterianos
Anti-Bacterial Agents
Colombia
Infecciones por Klebsiella
Klebsiella Infections
Klebsiella pneumoniae
Pruebas de Sensibilidad Microbiana
Microbial Sensitivity Tests
Leche - microbiología
Milk - microbiology
beta-Lactamasas
beta-Lactamases
Tanques de leche
Milk tanks
Conteo bacteriano
Bacterial counting
Resistencia a los antimicrobianos
Antimicrobial resistance
Ganado bovino
Cattle
Ganadería lechera
Dairying
Escherichia coli
Explotaciones agrarias
Farms
http://aims.fao.org/aos/agrovoc/c_25810
http://aims.fao.org/aos/agrovoc/c_16691
http://aims.fao.org/aos/agrovoc/c_662faf6f
http://aims.fao.org/aos/agrovoc/c_1391
http://aims.fao.org/aos/agrovoc/c_10274
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_2809
https://id.nlm.nih.gov/mesh/D000900
https://id.nlm.nih.gov/mesh/D003105
https://id.nlm.nih.gov/mesh/D007710
https://id.nlm.nih.gov/mesh/D007711
https://id.nlm.nih.gov/mesh/D008826
https://id.nlm.nih.gov/mesh/D008892
https://id.nlm.nih.gov/mesh/D001618
title_short Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
title_full Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
title_fullStr Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
title_full_unstemmed Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
title_sort Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia
dc.creator.fl_str_mv Ágredo Campos, Ángela Sofía
Fernández Silva, Jorge Arturo
Ramírez Vásquez, Nicolás Fernando
Akineden, Ömer
dc.contributor.author.none.fl_str_mv Ágredo Campos, Ángela Sofía
Fernández Silva, Jorge Arturo
Ramírez Vásquez, Nicolás Fernando
Akineden, Ömer
dc.contributor.researchgroup.spa.fl_str_mv CENTAURO
dc.subject.decs.none.fl_str_mv Antibacterianos
Anti-Bacterial Agents
Colombia
Infecciones por Klebsiella
Klebsiella Infections
Klebsiella pneumoniae
Pruebas de Sensibilidad Microbiana
Microbial Sensitivity Tests
Leche - microbiología
Milk - microbiology
beta-Lactamasas
beta-Lactamases
topic Antibacterianos
Anti-Bacterial Agents
Colombia
Infecciones por Klebsiella
Klebsiella Infections
Klebsiella pneumoniae
Pruebas de Sensibilidad Microbiana
Microbial Sensitivity Tests
Leche - microbiología
Milk - microbiology
beta-Lactamasas
beta-Lactamases
Tanques de leche
Milk tanks
Conteo bacteriano
Bacterial counting
Resistencia a los antimicrobianos
Antimicrobial resistance
Ganado bovino
Cattle
Ganadería lechera
Dairying
Escherichia coli
Explotaciones agrarias
Farms
http://aims.fao.org/aos/agrovoc/c_25810
http://aims.fao.org/aos/agrovoc/c_16691
http://aims.fao.org/aos/agrovoc/c_662faf6f
http://aims.fao.org/aos/agrovoc/c_1391
http://aims.fao.org/aos/agrovoc/c_10274
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_2809
https://id.nlm.nih.gov/mesh/D000900
https://id.nlm.nih.gov/mesh/D003105
https://id.nlm.nih.gov/mesh/D007710
https://id.nlm.nih.gov/mesh/D007711
https://id.nlm.nih.gov/mesh/D008826
https://id.nlm.nih.gov/mesh/D008892
https://id.nlm.nih.gov/mesh/D001618
dc.subject.agrovoc.none.fl_str_mv Tanques de leche
Milk tanks
Conteo bacteriano
Bacterial counting
Resistencia a los antimicrobianos
Antimicrobial resistance
Ganado bovino
Cattle
Ganadería lechera
Dairying
Escherichia coli
Explotaciones agrarias
Farms
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_25810
http://aims.fao.org/aos/agrovoc/c_16691
http://aims.fao.org/aos/agrovoc/c_662faf6f
http://aims.fao.org/aos/agrovoc/c_1391
http://aims.fao.org/aos/agrovoc/c_10274
http://aims.fao.org/aos/agrovoc/c_33700
http://aims.fao.org/aos/agrovoc/c_2809
dc.subject.meshuri.none.fl_str_mv https://id.nlm.nih.gov/mesh/D000900
https://id.nlm.nih.gov/mesh/D003105
https://id.nlm.nih.gov/mesh/D007710
https://id.nlm.nih.gov/mesh/D007711
https://id.nlm.nih.gov/mesh/D008826
https://id.nlm.nih.gov/mesh/D008892
https://id.nlm.nih.gov/mesh/D001618
description ABSTRACT: The objective of the study was to evaluate the frequency and genetic characteristics of ESBL-producing Escherichia coli and Klebsiella spp. and the risk factors associated with a high total bacterial count in bulk tank milk samples of dairy farms in three municipalities of the Antioquia Department, Colombia. Fifteen samples were positive for E. coli and Klebsiella spp. Subsequent analysis of the 16 S rRNA gene sequences confirmed these isolates included E. coli (n=3), K. oxytoca (n=11), and K. pneumoniae (n=1). None of the isolates was positive for ESBL identification by phenotypic methods, but the only the isolate of K. pneumoniae was positive for the blaSHV61 gene by sequence analysis. The antibiotic susceptibility evaluation for all Klebsiella spp. isolates identified resistance to fosfomycin (50%; 6/12) and ampicillin (100%; 12/12). While most of the herds maintain adequate hygienic quality, specific risk factors such as having more than 60 milking cows, frequent changes in milkers, milking in paddocks, and using a chlorinated product for pre-dipping have been identified as associated with a high total bacterial count>100,000 CFU/mL in bulk tank milk. However, certain variables including the milker being the owner of the animals and the proper washing and disinfection of the milking machine contribute to maintain a high level of hygiene and quality in the raw milk stored in the tanks. In conclusion, the frequency of ESBL producers was relatively low, with only K. pneumoniae testing positive for the blaSHV ESBL type. The presence of these bacteria in milk tanks represents a potential risk to public health for consumers of raw milk and its derivatives.
publishDate 2024
dc.date.accessioned.none.fl_str_mv 2024-09-24T15:06:04Z
dc.date.available.none.fl_str_mv 2024-09-24T15:06:04Z
dc.date.issued.none.fl_str_mv 2024
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
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dc.identifier.citation.spa.fl_str_mv Campos ÁÁ, Akineden Ö, Fernández-Silva JA, Ramírez-Vásquez NF. Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia. Braz J Microbiol. 2024 Sep;55(3):3009-3019. doi: 10.1007/s42770-024-01396-w.
dc.identifier.issn.none.fl_str_mv 1517-8382
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/42373
dc.identifier.doi.none.fl_str_mv 10.1007/s42770-024-01396-w
dc.identifier.eissn.none.fl_str_mv 1678-4405
identifier_str_mv Campos ÁÁ, Akineden Ö, Fernández-Silva JA, Ramírez-Vásquez NF. Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia. Braz J Microbiol. 2024 Sep;55(3):3009-3019. doi: 10.1007/s42770-024-01396-w.
1517-8382
10.1007/s42770-024-01396-w
1678-4405
url https://hdl.handle.net/10495/42373
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Braz. J. Microbiol.
dc.relation.citationendpage.spa.fl_str_mv 3019
dc.relation.citationissue.spa.fl_str_mv 3
dc.relation.citationstartpage.spa.fl_str_mv 3009
dc.relation.citationvolume.spa.fl_str_mv 55
dc.relation.ispartofjournal.spa.fl_str_mv Brazilian Journal of Microbiology
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spelling Ágredo Campos, Ángela SofíaFernández Silva, Jorge ArturoRamírez Vásquez, Nicolás FernandoAkineden, ÖmerCENTAURO2024-09-24T15:06:04Z2024-09-24T15:06:04Z2024Campos ÁÁ, Akineden Ö, Fernández-Silva JA, Ramírez-Vásquez NF. Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in Colombia. Braz J Microbiol. 2024 Sep;55(3):3009-3019. doi: 10.1007/s42770-024-01396-w.1517-8382https://hdl.handle.net/10495/4237310.1007/s42770-024-01396-w1678-4405ABSTRACT: The objective of the study was to evaluate the frequency and genetic characteristics of ESBL-producing Escherichia coli and Klebsiella spp. and the risk factors associated with a high total bacterial count in bulk tank milk samples of dairy farms in three municipalities of the Antioquia Department, Colombia. Fifteen samples were positive for E. coli and Klebsiella spp. Subsequent analysis of the 16 S rRNA gene sequences confirmed these isolates included E. coli (n=3), K. oxytoca (n=11), and K. pneumoniae (n=1). None of the isolates was positive for ESBL identification by phenotypic methods, but the only the isolate of K. pneumoniae was positive for the blaSHV61 gene by sequence analysis. The antibiotic susceptibility evaluation for all Klebsiella spp. isolates identified resistance to fosfomycin (50%; 6/12) and ampicillin (100%; 12/12). While most of the herds maintain adequate hygienic quality, specific risk factors such as having more than 60 milking cows, frequent changes in milkers, milking in paddocks, and using a chlorinated product for pre-dipping have been identified as associated with a high total bacterial count>100,000 CFU/mL in bulk tank milk. However, certain variables including the milker being the owner of the animals and the proper washing and disinfection of the milking machine contribute to maintain a high level of hygiene and quality in the raw milk stored in the tanks. In conclusion, the frequency of ESBL producers was relatively low, with only K. pneumoniae testing positive for the blaSHV ESBL type. The presence of these bacteria in milk tanks represents a potential risk to public health for consumers of raw milk and its derivatives.Colombia. Ministerio de Ciencia, Tecnología e Innovación - MinCienciasCOL000126211 páginasapplication/pdfengSociedade Brasileira de MicrobiologiaSpringerRío de Janeiro, Brasilhttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Extended-spectrum beta-lactamase-producing Klebsiella pneumoniae and risk factors associated with high total bacterial count in bulk tank milk from dairy farms in ColombiaArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAntibacterianosAnti-Bacterial AgentsColombiaInfecciones por KlebsiellaKlebsiella InfectionsKlebsiella pneumoniaePruebas de Sensibilidad MicrobianaMicrobial Sensitivity TestsLeche - microbiologíaMilk - microbiologybeta-Lactamasasbeta-LactamasesTanques de lecheMilk tanksConteo bacterianoBacterial countingResistencia a los antimicrobianosAntimicrobial resistanceGanado bovinoCattleGanadería lecheraDairyingEscherichia coliExplotaciones agrariasFarmshttp://aims.fao.org/aos/agrovoc/c_25810http://aims.fao.org/aos/agrovoc/c_16691http://aims.fao.org/aos/agrovoc/c_662faf6fhttp://aims.fao.org/aos/agrovoc/c_1391http://aims.fao.org/aos/agrovoc/c_10274http://aims.fao.org/aos/agrovoc/c_33700http://aims.fao.org/aos/agrovoc/c_2809https://id.nlm.nih.gov/mesh/D000900https://id.nlm.nih.gov/mesh/D003105https://id.nlm.nih.gov/mesh/D007710https://id.nlm.nih.gov/mesh/D007711https://id.nlm.nih.gov/mesh/D008826https://id.nlm.nih.gov/mesh/D008892https://id.nlm.nih.gov/mesh/D001618Braz. J. Microbiol.30193300955Brazilian Journal of MicrobiologyMinCiencias 111580763373, contract 755–2018RoR:03fd5ne08PublicationCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstreams/defb91e6-2ddb-45b8-8552-fdb355a5a2a5/download1646d1f6b96dbbbc38035efc9239ac9cMD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/4dc219ef-2ed5-4fcf-8eaf-0f29eb4a1e52/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADORIGINALAgredoAngela_2024_Extended-spectrum_beta-lactamase.pdfAgredoAngela_2024_Extended-spectrum_beta-lactamase.pdfArtículo de investigaciónapplication/pdf1260140https://bibliotecadigital.udea.edu.co/bitstreams/90ec0bf4-b1c2-4515-a571-05cf8bdc5fb4/downloadaad38db0a721d9daf7e717414051a008MD51trueAnonymousREADTEXTAgredoAngela_2024_Extended-spectrum_beta-lactamase.pdf.txtAgredoAngela_2024_Extended-spectrum_beta-lactamase.pdf.txtExtracted texttext/plain54948https://bibliotecadigital.udea.edu.co/bitstreams/b010ff20-34a1-4b05-9024-2350e4a67a8e/download76e354304a1655b2bcd496713734a166MD54falseAnonymousREADTHUMBNAILAgredoAngela_2024_Extended-spectrum_beta-lactamase.pdf.jpgAgredoAngela_2024_Extended-spectrum_beta-lactamase.pdf.jpgGenerated Thumbnailimage/jpeg15762https://bibliotecadigital.udea.edu.co/bitstreams/1107b2f9-51a3-4175-8874-519e0f24d543/download5a0bddbb04fe7548c2badc2d35411f1dMD55falseAnonymousREAD10495/42373oai:bibliotecadigital.udea.edu.co:10495/423732025-03-26 22:25:39.734http://creativecommons.org/licenses/by/2.5/co/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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