Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia

ABSTRACT: Background: Two biotypes of Aberdeen Angus cattle breed, known as Old Type and New Type, that differ in their origin and beef production are formally recognized. In Colombia, this breed has been commercialized for approximately 80 years. Studies on the origin, kinship and levels of genetic...

Full description

Autores:
Moreno Sierra, Alejandra María
Cerón Muñoz, Mario Fernando
Soto Calderón, Iván Darío
Tipo de recurso:
Article of investigation
Fecha de publicación:
2021
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/34425
Acceso en línea:
https://hdl.handle.net/10495/34425
Palabra clave:
Bovinos
Cattle
Estructuras Genéticas
Genetic Structures
ADN Mitocondrial
DNA, Mitochondrial
Genética de Población
Genetics, Population
Fenotipo
Phenotype
Bos taurus
Ganado de carne
Beef cattle
Variación Genética
Genetic Variation
Raza bovina
Cattle breeds
Biotipos
Biotypes
Microsatélites
Microsatellites
Ascendencia
Ancestry
http://aims.fao.org/aos/agrovoc/c_9372
http://aims.fao.org/aos/agrovoc/c_862
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_c5f298d3
http://aims.fao.org/aos/agrovoc/c_16166
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_394
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-sa/2.5/co/
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oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/34425
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
dc.title.translated.spa.fl_str_mv Estructura genética poblacional de dos hatos de ganado bovino Aberdeen Angus en Colombia
Estrutura genética da população de dois rebanhos da raça Aberdeen Angus na Colômbia
title Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
spellingShingle Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
Bovinos
Cattle
Estructuras Genéticas
Genetic Structures
ADN Mitocondrial
DNA, Mitochondrial
Genética de Población
Genetics, Population
Fenotipo
Phenotype
Bos taurus
Ganado de carne
Beef cattle
Variación Genética
Genetic Variation
Raza bovina
Cattle breeds
Biotipos
Biotypes
Microsatélites
Microsatellites
Ascendencia
Ancestry
http://aims.fao.org/aos/agrovoc/c_9372
http://aims.fao.org/aos/agrovoc/c_862
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_c5f298d3
http://aims.fao.org/aos/agrovoc/c_16166
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_394
title_short Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
title_full Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
title_fullStr Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
title_full_unstemmed Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
title_sort Population genetic structure of two herds of Aberdeen Angus cattle breed in Colombia
dc.creator.fl_str_mv Moreno Sierra, Alejandra María
Cerón Muñoz, Mario Fernando
Soto Calderón, Iván Darío
dc.contributor.author.none.fl_str_mv Moreno Sierra, Alejandra María
Cerón Muñoz, Mario Fernando
Soto Calderón, Iván Darío
dc.contributor.researchgroup.spa.fl_str_mv Grupo de Investigación en Agrociencias Biodiversidad y Territorio GAMMA
dc.subject.decs.none.fl_str_mv Bovinos
Cattle
Estructuras Genéticas
Genetic Structures
ADN Mitocondrial
DNA, Mitochondrial
Genética de Población
Genetics, Population
Fenotipo
Phenotype
topic Bovinos
Cattle
Estructuras Genéticas
Genetic Structures
ADN Mitocondrial
DNA, Mitochondrial
Genética de Población
Genetics, Population
Fenotipo
Phenotype
Bos taurus
Ganado de carne
Beef cattle
Variación Genética
Genetic Variation
Raza bovina
Cattle breeds
Biotipos
Biotypes
Microsatélites
Microsatellites
Ascendencia
Ancestry
http://aims.fao.org/aos/agrovoc/c_9372
http://aims.fao.org/aos/agrovoc/c_862
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_c5f298d3
http://aims.fao.org/aos/agrovoc/c_16166
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_394
dc.subject.agrovoc.none.fl_str_mv Bos taurus
Ganado de carne
Beef cattle
Variación Genética
Genetic Variation
Raza bovina
Cattle breeds
Biotipos
Biotypes
Microsatélites
Microsatellites
Ascendencia
Ancestry
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_9372
http://aims.fao.org/aos/agrovoc/c_862
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_c5f298d3
http://aims.fao.org/aos/agrovoc/c_16166
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_394
description ABSTRACT: Background: Two biotypes of Aberdeen Angus cattle breed, known as Old Type and New Type, that differ in their origin and beef production are formally recognized. In Colombia, this breed has been commercialized for approximately 80 years. Studies on the origin, kinship and levels of genetic diversity of this breed in Colombian herds are scarce, yet important for planning crossing and management strategies. Objective: To measure the genetic diversity and structure of two Colombian herds of Old Type and New Type biotypes of Aberdeen Angus from Huila and Cundinamarca provinces and assess mitochondrial introgression with other breeds. Methods: A set of ten microsatellites and sequences of the Mitochondrial Control Region were characterized. Estimators of genetic diversity and population differentiation along with tests of population assignment were applied. Results: Nuclear loci were highly polymorphic as shown by the Polymorphic Information Content (0.599) and the Probability of Identity (1.896 10-08). Both populations were highly diverse and clearly differentiated into two groups corresponding to the Old Type and New Type phenotypes. In contrast, mitochondrial data failed to distinguish these two groups and showed extensive admixture. Conclusions: This study optimized a set of ten highly polymorphic nuclear markers that may be used for parentage and population genetic studies of Aberdeen Angus. Genetic differentiation in these loci agreed with phenotypic differences of the Old and New Types. However, mitochondrial data indicated ancestry of multiple European breeds in the origin of Colombian Aberdeen Angus.
publishDate 2021
dc.date.issued.none.fl_str_mv 2021
dc.date.accessioned.none.fl_str_mv 2023-04-01T23:38:08Z
dc.date.available.none.fl_str_mv 2023-04-01T23:38:08Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
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format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.issn.none.fl_str_mv 2256-2958
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/34425
dc.identifier.doi.none.fl_str_mv 10.17533/udea.rccp.v34n4a05
identifier_str_mv 2256-2958
10.17533/udea.rccp.v34n4a05
url https://hdl.handle.net/10495/34425
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Rev. Colomb. Cienc. Pecu.
dc.relation.citationendpage.spa.fl_str_mv 290
dc.relation.citationissue.spa.fl_str_mv 4
dc.relation.citationstartpage.spa.fl_str_mv 278
dc.relation.citationvolume.spa.fl_str_mv 34
dc.relation.ispartofjournal.spa.fl_str_mv Revista Colombiana de Ciencias Pecuarias
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by-nc-sa/2.5/co/
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by-nc-sa/4.0/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
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eu_rights_str_mv openAccess
dc.format.extent.spa.fl_str_mv 13
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad de Antioquia, Facultad de Ciencias Agrarias
dc.publisher.place.spa.fl_str_mv Medellín, Colombia
dc.publisher.faculty.spa.fl_str_mv sin facultad - programa
institution Universidad de Antioquia
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spelling Moreno Sierra, Alejandra MaríaCerón Muñoz, Mario FernandoSoto Calderón, Iván DaríoGrupo de Investigación en Agrociencias Biodiversidad y Territorio GAMMA2023-04-01T23:38:08Z2023-04-01T23:38:08Z20212256-2958https://hdl.handle.net/10495/3442510.17533/udea.rccp.v34n4a05ABSTRACT: Background: Two biotypes of Aberdeen Angus cattle breed, known as Old Type and New Type, that differ in their origin and beef production are formally recognized. In Colombia, this breed has been commercialized for approximately 80 years. Studies on the origin, kinship and levels of genetic diversity of this breed in Colombian herds are scarce, yet important for planning crossing and management strategies. Objective: To measure the genetic diversity and structure of two Colombian herds of Old Type and New Type biotypes of Aberdeen Angus from Huila and Cundinamarca provinces and assess mitochondrial introgression with other breeds. Methods: A set of ten microsatellites and sequences of the Mitochondrial Control Region were characterized. Estimators of genetic diversity and population differentiation along with tests of population assignment were applied. Results: Nuclear loci were highly polymorphic as shown by the Polymorphic Information Content (0.599) and the Probability of Identity (1.896 10-08). Both populations were highly diverse and clearly differentiated into two groups corresponding to the Old Type and New Type phenotypes. In contrast, mitochondrial data failed to distinguish these two groups and showed extensive admixture. Conclusions: This study optimized a set of ten highly polymorphic nuclear markers that may be used for parentage and population genetic studies of Aberdeen Angus. Genetic differentiation in these loci agreed with phenotypic differences of the Old and New Types. However, mitochondrial data indicated ancestry of multiple European breeds in the origin of Colombian Aberdeen Angus.RESUMEN: Antecedentes: Dentro de la raza Aberdeen Angus existen dos biotipos conocidos como Old Type y New Type, las cuales difieren en su origen y producción de carne. En Colombia, esta raza se ha venido comercializando desde hace aproximadamente 80 años. No obstante, aún no se han realizado estudios sobre su origen, parentesco y niveles de diversidad genética de esta raza en hatos colombianos, lo cual es importante para planear estrategias de cruce y manejo. Objetivo: Medir la diversidad y estructura genética de dos hatos colombianos de Aberdeen Angus Old Type y New Type de Huila y Cundinamarca y evaluar la introgresión mitocondrial con otras razas. Métodos: Se caracterizó un grupo de diez loci microsatélite y se secuenció la Región Control Mitocondrial. Se aplicaron estimadores de diversidad genética y diferenciación poblacional, junto con pruebas de asignación poblacional. Resultados: Los loci microsatélite fueron altamente polimórficos, tal como lo indicaron el Contenido de Información Polimórfica (0,599) y la Probabilidad de Identidad (1,896 10-08). Las poblaciones evaluadas de Aberdeen Angus en Colombia fueron altamente diversas y se diferenciaron claramente en dos grupos correspondientes a los fenotipos Old Type y New Type. En contraste, los datos mitocondriales no recobraron estos dos grupos y mostraron una amplia mezcla genética. Conclusiones: Este estudio optimizó un grupo de diez marcadores altamente polimórficos que pueden ser usados para estudios de parentesco y genética poblacional de Aberdeen Angus. La diferenciación genética en loci nucleares concordó con las diferencias fenotípicas entre Old y New Types, pero los datos mitocondriales indicaron ancestría de múltiples razas europeas en el origen del Aberdeen Angus colombiano.RESUMO: Antecedentes: Dentro da raça Aberdeen Angus há dois biótipos conhecidos como Old Type e New Type, que diferem em sua origem e produção de carne. Na Colômbia, esta raça é comercializada há aproximadamente 80 anos. Entretanto, estudos sobre a origem, o parentesco e os níveis de diversidade genética desta raça em rebanhos colombianos ainda não foram realizados, o que é importante para o planejamento de cruzamentos e estratégias de manejo. Objetivo: Medir a diversidade genética e a estrutura de dois rebanhos colombianos de biótipos de Old Type e New Type de Aberdeen Angus de Huila e Cundinamarca e avaliar a introgressão mitocondrial com outras raças. Métodos: Um grupo de dez loci de microssatélites foi caracterizado e a Região de Controle Mitocondrial foi sequenciada. As estimativas de diversidade genética e diferenciação populacional foram aplicadas, juntamente com testes de designação populacional. Resultados: Os locus microssatélites foram altamente polimórficos, conforme indicado pelo Conteúdo de Infomação Polimórfica (0,599) e Probabilidade de Identidade (1,896 10-08). As populações avaliadas de Aberden Angus na Colômbia eram altamente diversificadas e claramente diferenciadas em dois grupos correspondentes aos fenótipos do Old Type e New Type. Em contraste, os dados mitocondriais não recuperaram esses dois grupos e mostraram um amplo mix genético. Conclusões: Este estudo otimizou um grupo de dez marcadores altamente polimórficos que podem ser usados para estudos genéticos de parentesco e população de Aberdeen Angus. A diferenciação genética nos loci nucleares concordou com as diferenças fenotípicas entre os Old e New Types, mas os dados mitocondriais indicam ancestralidade de várias raças européias na origem do Aberdeen Angus colombiano.COL000677913application/pdfengUniversidad de Antioquia, Facultad de Ciencias AgrariasMedellín, Colombiasin facultad - programahttp://creativecommons.org/licenses/by-nc-sa/2.5/co/https://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Population genetic structure of two herds of Aberdeen Angus cattle breed in ColombiaEstructura genética poblacional de dos hatos de ganado bovino Aberdeen Angus en ColombiaEstrutura genética da população de dois rebanhos da raça Aberdeen Angus na ColômbiaArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionBovinosCattleEstructuras GenéticasGenetic StructuresADN MitocondrialDNA, MitochondrialGenética de PoblaciónGenetics, PopulationFenotipoPhenotypeBos taurusGanado de carneBeef cattleVariación GenéticaGenetic VariationRaza bovinaCattle breedsBiotiposBiotypesMicrosatélitesMicrosatellitesAscendenciaAncestryhttp://aims.fao.org/aos/agrovoc/c_9372http://aims.fao.org/aos/agrovoc/c_862http://aims.fao.org/aos/agrovoc/c_15975http://aims.fao.org/aos/agrovoc/c_c5f298d3http://aims.fao.org/aos/agrovoc/c_16166http://aims.fao.org/aos/agrovoc/c_36574http://aims.fao.org/aos/agrovoc/c_394Rev. Colomb. Cienc. 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