Contribution to a reference library of DNA barcodes of Colombian freshwater fishes

ABSTRACT: The Barcode of Life initiative was originally motivated by the large number of species, taxonomic difficulties and the limited number of expert taxonomists. Colombia has 1,610 freshwater fish species and comprises the second largest diversity of this group in the world. As genetic informat...

Full description

Autores:
Mejía Estrada, Manuela
Soto Calderón, Iván Darío
Jiménez Segura, Luz Fernanda
Hernández Zapata, Marcela
Tipo de recurso:
Article of data
Fecha de publicación:
2022
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/34806
Acceso en línea:
https://hdl.handle.net/10495/34806
Palabra clave:
Ictiología
Ichthyology
Especies introducidas
Introduced species
Código de barras de ADN
DNA barcoding
Cytochrome c oxidase subunit I (COX1)
Ichthyofauna
Ictiofauna
Occurrence records
registros de ocurrencia
http://aims.fao.org/aos/agrovoc/c_1333440888271
http://aims.fao.org/aos/agrovoc/c_dd176cb0
Rights
openAccess
License
https://creativecommons.org/licenses/by/4.0/
id UDEA2_8b82722fe11e7f300253e970c0a1ba74
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/34806
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
title Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
spellingShingle Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
Ictiología
Ichthyology
Especies introducidas
Introduced species
Código de barras de ADN
DNA barcoding
Cytochrome c oxidase subunit I (COX1)
Ichthyofauna
Ictiofauna
Occurrence records
registros de ocurrencia
http://aims.fao.org/aos/agrovoc/c_1333440888271
http://aims.fao.org/aos/agrovoc/c_dd176cb0
title_short Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
title_full Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
title_fullStr Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
title_full_unstemmed Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
title_sort Contribution to a reference library of DNA barcodes of Colombian freshwater fishes
dc.creator.fl_str_mv Mejía Estrada, Manuela
Soto Calderón, Iván Darío
Jiménez Segura, Luz Fernanda
Hernández Zapata, Marcela
dc.contributor.author.none.fl_str_mv Mejía Estrada, Manuela
Soto Calderón, Iván Darío
Jiménez Segura, Luz Fernanda
Hernández Zapata, Marcela
dc.contributor.researchgroup.spa.fl_str_mv Grupo de Ictiología
Grupo de Investigación en Agrociencias Biodiversidad y Territorio GAMMA
dc.subject.lemb.none.fl_str_mv Ictiología
Ichthyology
topic Ictiología
Ichthyology
Especies introducidas
Introduced species
Código de barras de ADN
DNA barcoding
Cytochrome c oxidase subunit I (COX1)
Ichthyofauna
Ictiofauna
Occurrence records
registros de ocurrencia
http://aims.fao.org/aos/agrovoc/c_1333440888271
http://aims.fao.org/aos/agrovoc/c_dd176cb0
dc.subject.agrovoc.none.fl_str_mv Especies introducidas
Introduced species
Código de barras de ADN
DNA barcoding
dc.subject.proposal.spa.fl_str_mv Cytochrome c oxidase subunit I (COX1)
Ichthyofauna
Ictiofauna
Occurrence records
registros de ocurrencia
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_1333440888271
http://aims.fao.org/aos/agrovoc/c_dd176cb0
description ABSTRACT: The Barcode of Life initiative was originally motivated by the large number of species, taxonomic difficulties and the limited number of expert taxonomists. Colombia has 1,610 freshwater fish species and comprises the second largest diversity of this group in the world. As genetic information continues to be limited, we constructed a reference collection of DNA sequences of Colombian freshwater fishes deposited in the Ichthyology Collection of the University of Antioquia (CIUA), thus joining the multiple efforts that have been made in the country to contribute to the knowledge of genetic diversity in order to strengthen the inventories of biological collections and facilitate the solution of taxonomic issues in the future.
publishDate 2022
dc.date.issued.none.fl_str_mv 2022
dc.date.accessioned.none.fl_str_mv 2023-05-02T22:06:37Z
dc.date.available.none.fl_str_mv 2023-05-02T22:06:37Z
dc.type.spa.fl_str_mv Artículo de datos
dc.type.coar.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_beb9
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ARTDATA
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
format http://purl.org/coar/resource_type/c_beb9
status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv Mejía-Estrada M, Jiménez-Segura LF, Hernández-Zapata M, Soto Calderón ID (2022) Contribution to a reference library of DNA barcodes of Colombian freshwater fishes. Biodiversity Data Journal 10: e65981. https://doi.org/10.3897/BDJ.10.e65981
dc.identifier.issn.none.fl_str_mv 1314-2828
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/34806
dc.identifier.doi.none.fl_str_mv 10.3897/BDJ.10.e65981
identifier_str_mv Mejía-Estrada M, Jiménez-Segura LF, Hernández-Zapata M, Soto Calderón ID (2022) Contribution to a reference library of DNA barcodes of Colombian freshwater fishes. Biodiversity Data Journal 10: e65981. https://doi.org/10.3897/BDJ.10.e65981
1314-2828
10.3897/BDJ.10.e65981
url https://hdl.handle.net/10495/34806
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Biodivers. Data. J.
dc.relation.citationendpage.spa.fl_str_mv 9
dc.relation.citationstartpage.spa.fl_str_mv 1
dc.relation.citationvolume.spa.fl_str_mv 10
dc.relation.ispartofjournal.spa.fl_str_mv Biodiversity Data Journal
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by/4.0/
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/2.5/co/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
rights_invalid_str_mv https://creativecommons.org/licenses/by/4.0/
http://creativecommons.org/licenses/by/2.5/co/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.extent.spa.fl_str_mv 9
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Pensoft Publishers
dc.publisher.place.spa.fl_str_mv Sofia, Bulgaria
institution Universidad de Antioquia
bitstream.url.fl_str_mv https://bibliotecadigital.udea.edu.co/bitstreams/cb75503a-7d58-4b55-8ed7-d5ab17c76d5a/download
https://bibliotecadigital.udea.edu.co/bitstreams/c317dd9e-f077-4ef0-9f37-74f5f3bf45fb/download
https://bibliotecadigital.udea.edu.co/bitstreams/ca6a4396-85c4-44c2-85ae-b4e251430e9f/download
https://bibliotecadigital.udea.edu.co/bitstreams/a2035b1a-6dad-4a05-bdac-399ebec98dd6/download
https://bibliotecadigital.udea.edu.co/bitstreams/236b5100-71fb-4d48-9d1d-99011149eb9f/download
bitstream.checksum.fl_str_mv cabc332bcefa68e044346297ea4f95d0
8a4605be74aa9ea9d79846c1fba20a33
1646d1f6b96dbbbc38035efc9239ac9c
adc482d1784b10522a4e76ddce5e4b9d
b3641a6c5d5ff51d0eb124735f13102b
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional de la Universidad de Antioquia
repository.mail.fl_str_mv aplicacionbibliotecadigitalbiblioteca@udea.edu.co
_version_ 1851052127818874880
spelling Mejía Estrada, ManuelaSoto Calderón, Iván DaríoJiménez Segura, Luz FernandaHernández Zapata, MarcelaGrupo de IctiologíaGrupo de Investigación en Agrociencias Biodiversidad y Territorio GAMMA2023-05-02T22:06:37Z2023-05-02T22:06:37Z2022Mejía-Estrada M, Jiménez-Segura LF, Hernández-Zapata M, Soto Calderón ID (2022) Contribution to a reference library of DNA barcodes of Colombian freshwater fishes. Biodiversity Data Journal 10: e65981. https://doi.org/10.3897/BDJ.10.e659811314-2828https://hdl.handle.net/10495/3480610.3897/BDJ.10.e65981ABSTRACT: The Barcode of Life initiative was originally motivated by the large number of species, taxonomic difficulties and the limited number of expert taxonomists. Colombia has 1,610 freshwater fish species and comprises the second largest diversity of this group in the world. As genetic information continues to be limited, we constructed a reference collection of DNA sequences of Colombian freshwater fishes deposited in the Ichthyology Collection of the University of Antioquia (CIUA), thus joining the multiple efforts that have been made in the country to contribute to the knowledge of genetic diversity in order to strengthen the inventories of biological collections and facilitate the solution of taxonomic issues in the future.COL0078704COL00067799application/pdfengPensoft PublishersSofia, Bulgariahttps://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/2.5/co/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Contribution to a reference library of DNA barcodes of Colombian freshwater fishesArtículo de datoshttp://purl.org/coar/resource_type/c_beb9http://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARTDATAhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionIctiologíaIchthyologyEspecies introducidasIntroduced speciesCódigo de barras de ADNDNA barcodingCytochrome c oxidase subunit I (COX1)IchthyofaunaIctiofaunaOccurrence recordsregistros de ocurrenciahttp://aims.fao.org/aos/agrovoc/c_1333440888271http://aims.fao.org/aos/agrovoc/c_dd176cb0Biodivers. Data. J.9110Biodiversity Data JournalPublicationORIGINALMejiaManuela_2022_ContributionReferenceLibraryDNA.pdfMejiaManuela_2022_ContributionReferenceLibraryDNA.pdfArtículo de datosapplication/pdf300709https://bibliotecadigital.udea.edu.co/bitstreams/cb75503a-7d58-4b55-8ed7-d5ab17c76d5a/downloadcabc332bcefa68e044346297ea4f95d0MD51trueAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/c317dd9e-f077-4ef0-9f37-74f5f3bf45fb/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstreams/ca6a4396-85c4-44c2-85ae-b4e251430e9f/download1646d1f6b96dbbbc38035efc9239ac9cMD52falseAnonymousREADTEXTMejiaManuela_2022_ContributionReferenceLibraryDNA.pdf.txtMejiaManuela_2022_ContributionReferenceLibraryDNA.pdf.txtExtracted texttext/plain21764https://bibliotecadigital.udea.edu.co/bitstreams/a2035b1a-6dad-4a05-bdac-399ebec98dd6/downloadadc482d1784b10522a4e76ddce5e4b9dMD56falseAnonymousREADTHUMBNAILMejiaManuela_2022_ContributionReferenceLibraryDNA.pdf.jpgMejiaManuela_2022_ContributionReferenceLibraryDNA.pdf.jpgGenerated Thumbnailimage/jpeg11235https://bibliotecadigital.udea.edu.co/bitstreams/236b5100-71fb-4d48-9d1d-99011149eb9f/downloadb3641a6c5d5ff51d0eb124735f13102bMD57falseAnonymousREAD10495/34806oai:bibliotecadigital.udea.edu.co:10495/348062025-03-26 17:23:22.27https://creativecommons.org/licenses/by/4.0/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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