Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)

ABSTRACT: The endangered marine gastropod, Lobatus gigas, is an important fishery resource in the Caribbean region. Microbiological and parasitological research of this species have been poorly addressed despite its role in ecological fitness, conservation status and prevention of potential pathogen...

Full description

Autores:
Alzate Restrepo, Juan Fernando
Cuartas Gallego, Jaison Hernán
Márquez Fernández, Edna Judith
Moreno Herrera, Claudia Ximena
Tipo de recurso:
Article of investigation
Fecha de publicación:
2018
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/38558
Acceso en línea:
https://hdl.handle.net/10495/38558
Palabra clave:
Enfermedades Parasitarias
Parasitic Diseases
Secuenciación de Nucleótidos de Alto Rendimiento
High-Throughput Nucleotide Sequencing
Biología Computacional
Computational Biology
Infecciones por Trematodos
Trematode Infections
https://id.nlm.nih.gov/mesh/D010272
https://id.nlm.nih.gov/mesh/D059014
https://id.nlm.nih.gov/mesh/D019295
https://id.nlm.nih.gov/mesh/D014201
Rights
openAccess
License
https://creativecommons.org/licenses/by/4.0/
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repository_id_str
dc.title.spa.fl_str_mv Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
title Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
spellingShingle Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
Enfermedades Parasitarias
Parasitic Diseases
Secuenciación de Nucleótidos de Alto Rendimiento
High-Throughput Nucleotide Sequencing
Biología Computacional
Computational Biology
Infecciones por Trematodos
Trematode Infections
https://id.nlm.nih.gov/mesh/D010272
https://id.nlm.nih.gov/mesh/D059014
https://id.nlm.nih.gov/mesh/D019295
https://id.nlm.nih.gov/mesh/D014201
title_short Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
title_full Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
title_fullStr Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
title_full_unstemmed Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
title_sort Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
dc.creator.fl_str_mv Alzate Restrepo, Juan Fernando
Cuartas Gallego, Jaison Hernán
Márquez Fernández, Edna Judith
Moreno Herrera, Claudia Ximena
dc.contributor.author.none.fl_str_mv Alzate Restrepo, Juan Fernando
Cuartas Gallego, Jaison Hernán
Márquez Fernández, Edna Judith
Moreno Herrera, Claudia Ximena
dc.contributor.researchgroup.spa.fl_str_mv Grupo de Parasitología, Universidad de Antioquia
dc.subject.decs.none.fl_str_mv Enfermedades Parasitarias
Parasitic Diseases
Secuenciación de Nucleótidos de Alto Rendimiento
High-Throughput Nucleotide Sequencing
Biología Computacional
Computational Biology
Infecciones por Trematodos
Trematode Infections
topic Enfermedades Parasitarias
Parasitic Diseases
Secuenciación de Nucleótidos de Alto Rendimiento
High-Throughput Nucleotide Sequencing
Biología Computacional
Computational Biology
Infecciones por Trematodos
Trematode Infections
https://id.nlm.nih.gov/mesh/D010272
https://id.nlm.nih.gov/mesh/D059014
https://id.nlm.nih.gov/mesh/D019295
https://id.nlm.nih.gov/mesh/D014201
dc.subject.meshuri.none.fl_str_mv https://id.nlm.nih.gov/mesh/D010272
https://id.nlm.nih.gov/mesh/D059014
https://id.nlm.nih.gov/mesh/D019295
https://id.nlm.nih.gov/mesh/D014201
description ABSTRACT: The endangered marine gastropod, Lobatus gigas, is an important fishery resource in the Caribbean region. Microbiological and parasitological research of this species have been poorly addressed despite its role in ecological fitness, conservation status and prevention of potential pathogenic infections. This study identified taxonomic groups associated with orange colored protrusions in the muscle of queen conchs using histological analysis, 454 pyrosequencing, and a combination of PCR amplification and automated Sanger sequencing. The molecular approaches indicate that the etiological agent of the muscle protrusions is a parasite belonging to the subclass Digenea. Additionally, the scope of the molecular technique allowed the detection of bacterial and fungi clades in the assignment analysis. This is the first evidence of a digenean infection in the muscle of this valuable Caribbean resource.
publishDate 2018
dc.date.issued.none.fl_str_mv 2018
dc.date.accessioned.none.fl_str_mv 2024-03-12T02:23:41Z
dc.date.available.none.fl_str_mv 2024-03-12T02:23:41Z
dc.type.spa.fl_str_mv Artículo de investigación
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dc.identifier.citation.spa.fl_str_mv Cuartas JH, Alzate JF, Moreno-Herrera CX, Marquez EJ. Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758). PeerJ. 2018 Feb 15;6:e4307. doi: 10.7717/peerj.4307. PMID: 29472996; PMCID: PMC5816965.
dc.identifier.issn.none.fl_str_mv 2167-8359
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/38558
dc.identifier.doi.none.fl_str_mv 10.7717/peerj.4307
identifier_str_mv Cuartas JH, Alzate JF, Moreno-Herrera CX, Marquez EJ. Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758). PeerJ. 2018 Feb 15;6:e4307. doi: 10.7717/peerj.4307. PMID: 29472996; PMCID: PMC5816965.
2167-8359
10.7717/peerj.4307
url https://hdl.handle.net/10495/38558
dc.language.iso.spa.fl_str_mv eng
language eng
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dc.relation.citationvolume.spa.fl_str_mv 6
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spelling Alzate Restrepo, Juan FernandoCuartas Gallego, Jaison HernánMárquez Fernández, Edna JudithMoreno Herrera, Claudia XimenaGrupo de Parasitología, Universidad de Antioquia2024-03-12T02:23:41Z2024-03-12T02:23:41Z2018Cuartas JH, Alzate JF, Moreno-Herrera CX, Marquez EJ. Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758). PeerJ. 2018 Feb 15;6:e4307. doi: 10.7717/peerj.4307. PMID: 29472996; PMCID: PMC5816965.2167-8359https://hdl.handle.net/10495/3855810.7717/peerj.4307ABSTRACT: The endangered marine gastropod, Lobatus gigas, is an important fishery resource in the Caribbean region. Microbiological and parasitological research of this species have been poorly addressed despite its role in ecological fitness, conservation status and prevention of potential pathogenic infections. This study identified taxonomic groups associated with orange colored protrusions in the muscle of queen conchs using histological analysis, 454 pyrosequencing, and a combination of PCR amplification and automated Sanger sequencing. The molecular approaches indicate that the etiological agent of the muscle protrusions is a parasite belonging to the subclass Digenea. Additionally, the scope of the molecular technique allowed the detection of bacterial and fungi clades in the assignment analysis. 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