Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758)
ABSTRACT: The endangered marine gastropod, Lobatus gigas, is an important fishery resource in the Caribbean region. Microbiological and parasitological research of this species have been poorly addressed despite its role in ecological fitness, conservation status and prevention of potential pathogen...
- Autores:
-
Alzate Restrepo, Juan Fernando
Cuartas Gallego, Jaison Hernán
Márquez Fernández, Edna Judith
Moreno Herrera, Claudia Ximena
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2018
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/38558
- Acceso en línea:
- https://hdl.handle.net/10495/38558
- Palabra clave:
- Enfermedades Parasitarias
Parasitic Diseases
Secuenciación de Nucleótidos de Alto Rendimiento
High-Throughput Nucleotide Sequencing
Biología Computacional
Computational Biology
Infecciones por Trematodos
Trematode Infections
https://id.nlm.nih.gov/mesh/D010272
https://id.nlm.nih.gov/mesh/D059014
https://id.nlm.nih.gov/mesh/D019295
https://id.nlm.nih.gov/mesh/D014201
- Rights
- openAccess
- License
- https://creativecommons.org/licenses/by/4.0/
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| dc.title.spa.fl_str_mv |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| title |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| spellingShingle |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) Enfermedades Parasitarias Parasitic Diseases Secuenciación de Nucleótidos de Alto Rendimiento High-Throughput Nucleotide Sequencing Biología Computacional Computational Biology Infecciones por Trematodos Trematode Infections https://id.nlm.nih.gov/mesh/D010272 https://id.nlm.nih.gov/mesh/D059014 https://id.nlm.nih.gov/mesh/D019295 https://id.nlm.nih.gov/mesh/D014201 |
| title_short |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| title_full |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| title_fullStr |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| title_full_unstemmed |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| title_sort |
Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758) |
| dc.creator.fl_str_mv |
Alzate Restrepo, Juan Fernando Cuartas Gallego, Jaison Hernán Márquez Fernández, Edna Judith Moreno Herrera, Claudia Ximena |
| dc.contributor.author.none.fl_str_mv |
Alzate Restrepo, Juan Fernando Cuartas Gallego, Jaison Hernán Márquez Fernández, Edna Judith Moreno Herrera, Claudia Ximena |
| dc.contributor.researchgroup.spa.fl_str_mv |
Grupo de Parasitología, Universidad de Antioquia |
| dc.subject.decs.none.fl_str_mv |
Enfermedades Parasitarias Parasitic Diseases Secuenciación de Nucleótidos de Alto Rendimiento High-Throughput Nucleotide Sequencing Biología Computacional Computational Biology Infecciones por Trematodos Trematode Infections |
| topic |
Enfermedades Parasitarias Parasitic Diseases Secuenciación de Nucleótidos de Alto Rendimiento High-Throughput Nucleotide Sequencing Biología Computacional Computational Biology Infecciones por Trematodos Trematode Infections https://id.nlm.nih.gov/mesh/D010272 https://id.nlm.nih.gov/mesh/D059014 https://id.nlm.nih.gov/mesh/D019295 https://id.nlm.nih.gov/mesh/D014201 |
| dc.subject.meshuri.none.fl_str_mv |
https://id.nlm.nih.gov/mesh/D010272 https://id.nlm.nih.gov/mesh/D059014 https://id.nlm.nih.gov/mesh/D019295 https://id.nlm.nih.gov/mesh/D014201 |
| description |
ABSTRACT: The endangered marine gastropod, Lobatus gigas, is an important fishery resource in the Caribbean region. Microbiological and parasitological research of this species have been poorly addressed despite its role in ecological fitness, conservation status and prevention of potential pathogenic infections. This study identified taxonomic groups associated with orange colored protrusions in the muscle of queen conchs using histological analysis, 454 pyrosequencing, and a combination of PCR amplification and automated Sanger sequencing. The molecular approaches indicate that the etiological agent of the muscle protrusions is a parasite belonging to the subclass Digenea. Additionally, the scope of the molecular technique allowed the detection of bacterial and fungi clades in the assignment analysis. This is the first evidence of a digenean infection in the muscle of this valuable Caribbean resource. |
| publishDate |
2018 |
| dc.date.issued.none.fl_str_mv |
2018 |
| dc.date.accessioned.none.fl_str_mv |
2024-03-12T02:23:41Z |
| dc.date.available.none.fl_str_mv |
2024-03-12T02:23:41Z |
| dc.type.spa.fl_str_mv |
Artículo de investigación |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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http://purl.org/coar/version/c_970fb48d4fbd8a85 |
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info:eu-repo/semantics/article |
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Cuartas JH, Alzate JF, Moreno-Herrera CX, Marquez EJ. Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758). PeerJ. 2018 Feb 15;6:e4307. doi: 10.7717/peerj.4307. PMID: 29472996; PMCID: PMC5816965. |
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2167-8359 |
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https://hdl.handle.net/10495/38558 |
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10.7717/peerj.4307 |
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Cuartas JH, Alzate JF, Moreno-Herrera CX, Marquez EJ. Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758). PeerJ. 2018 Feb 15;6:e4307. doi: 10.7717/peerj.4307. PMID: 29472996; PMCID: PMC5816965. 2167-8359 10.7717/peerj.4307 |
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https://hdl.handle.net/10495/38558 |
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eng |
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eng |
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PeerJ |
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PeerJ Inc. |
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Alzate Restrepo, Juan FernandoCuartas Gallego, Jaison HernánMárquez Fernández, Edna JudithMoreno Herrera, Claudia XimenaGrupo de Parasitología, Universidad de Antioquia2024-03-12T02:23:41Z2024-03-12T02:23:41Z2018Cuartas JH, Alzate JF, Moreno-Herrera CX, Marquez EJ. Metagenomic analysis of orange colored protrusions from the muscle of Queen Conch Lobatus gigas (Linnaeus, 1758). PeerJ. 2018 Feb 15;6:e4307. doi: 10.7717/peerj.4307. PMID: 29472996; PMCID: PMC5816965.2167-8359https://hdl.handle.net/10495/3855810.7717/peerj.4307ABSTRACT: The endangered marine gastropod, Lobatus gigas, is an important fishery resource in the Caribbean region. Microbiological and parasitological research of this species have been poorly addressed despite its role in ecological fitness, conservation status and prevention of potential pathogenic infections. This study identified taxonomic groups associated with orange colored protrusions in the muscle of queen conchs using histological analysis, 454 pyrosequencing, and a combination of PCR amplification and automated Sanger sequencing. The molecular approaches indicate that the etiological agent of the muscle protrusions is a parasite belonging to the subclass Digenea. Additionally, the scope of the molecular technique allowed the detection of bacterial and fungi clades in the assignment analysis. 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