Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X

ABSTRACT: The impact of molecular biology in sciences, and namely in what concerns the theme of this thesis (forensic sciences), has generated a large number of technical and theoretical developments. The application of molecular techniques to the basic sciences has always been followed by its appli...

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Autores:
Ibarra Rodríguez, Adriana Alexandra
Tipo de recurso:
Doctoral thesis
Fecha de publicación:
2015
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
spa
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/3093
Acceso en línea:
http://hdl.handle.net/10495/3093
Palabra clave:
Parámetros genéticos
Genetic parameters
Biology
Biología
ADN
DNA
Marcadores genéticos
Genetic markers
Genetica forense
Cromosoma X
http://aims.fao.org/aos/agrovoc/c_24847
http://aims.fao.org/aos/agrovoc/c_925
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24030
Rights
openAccess
License
http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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dc.title.spa.fl_str_mv Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
title Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
spellingShingle Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
Parámetros genéticos
Genetic parameters
Biology
Biología
ADN
DNA
Marcadores genéticos
Genetic markers
Genetica forense
Cromosoma X
http://aims.fao.org/aos/agrovoc/c_24847
http://aims.fao.org/aos/agrovoc/c_925
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24030
title_short Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
title_full Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
title_fullStr Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
title_full_unstemmed Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
title_sort Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma X
dc.creator.fl_str_mv Ibarra Rodríguez, Adriana Alexandra
dc.contributor.advisor.none.fl_str_mv Sousa Botelho, María Leonor Rodrigues de
dc.contributor.author.none.fl_str_mv Ibarra Rodríguez, Adriana Alexandra
dc.subject.agrovoc.none.fl_str_mv Parámetros genéticos
Genetic parameters
Biology
Biología
ADN
DNA
Marcadores genéticos
Genetic markers
topic Parámetros genéticos
Genetic parameters
Biology
Biología
ADN
DNA
Marcadores genéticos
Genetic markers
Genetica forense
Cromosoma X
http://aims.fao.org/aos/agrovoc/c_24847
http://aims.fao.org/aos/agrovoc/c_925
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24030
dc.subject.proposal.spa.fl_str_mv Genetica forense
Cromosoma X
dc.subject.agrovocuri.none.fl_str_mv http://aims.fao.org/aos/agrovoc/c_24847
http://aims.fao.org/aos/agrovoc/c_925
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24030
description ABSTRACT: The impact of molecular biology in sciences, and namely in what concerns the theme of this thesis (forensic sciences), has generated a large number of technical and theoretical developments. The application of molecular techniques to the basic sciences has always been followed by its application to forensic sciences, although the statistical principles for interpretation have remained without many variations. The subject of this thesis is inserted into the field of forensic genetics, and the main objective was to investigate the utility of new genetic markers that could be useful in certain forensic investigation scenarios, because of their molecular structure or inheritance pattern. The selection of genetic markers took into account the situation of Colombia regarding the forensic casework, in which a large number of cases cannot be solved through the use of conventional markers, such as STRs (short tandem repeats), alone. We chose to study SNP (single nucleotide polymorphism) autosomal biallelic markers, which have a molecular structure that facilitates their study on degraded samples, as well as Indel (insertion-deletion) markers located in the X chromosome, which may have advantages in some complex cases of affiliation over the autosomal markers used routinely, due to their mode of genetic transmission. With the aim stated above, a sampling was conducted in various departments of Colombia, including Huila, Arauca, Nariño (urban and native populations), Norte de Santander, Antioquia, Boyacá-Cundinamarca, Chocó, Santander, Casanare, Meta and the city of Cartagena (in the department of Bolivar). The samples obtained with informed consent of the participants for this study were genotyped using two sets of genetic markers: (1) the 52-Plex SNPforID, including 52 autosomal SNP markers; (2) and the 32 X-indels, consisting of 32 insertion deletion markers, located in X chromosome specific regions. Based on the genotypic results obtained, allele frequencies were calculated for all analyzed markers. These values were used to estimate genetic parameters of forensic interest. Furthermore, for the two studied groups of markers, population differentiation analyses were performed to evaluate whether the population was stratified and to determine the structure of a database representative of the Colombian populations for these markers…
publishDate 2015
dc.date.accessioned.none.fl_str_mv 2015-09-10T18:12:29Z
dc.date.available.none.fl_str_mv 2015-09-10T18:12:29Z
dc.date.issued.none.fl_str_mv 2015
dc.type.spa.fl_str_mv Tesis/Trabajo de grado - Monografía - Doctorado
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dc.identifier.citation.spa.fl_str_mv Ibarra Rodríguez, A. A. (2015). Estudio de marcadores genéticos bialélicos para aplicaciones forenses: SNPs autosómicos e indels específicos de cromosoma X (Tesis doctoral). Universidad de Antioquia, Medellín, Colombia.
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/3093
identifier_str_mv Ibarra Rodríguez, A. A. (2015). Estudio de marcadores genéticos bialélicos para aplicaciones forenses: SNPs autosómicos e indels específicos de cromosoma X (Tesis doctoral). Universidad de Antioquia, Medellín, Colombia.
url http://hdl.handle.net/10495/3093
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Atribución-NoComercial-SinDerivadas 2.5 Colombia (CC BY-NC-ND 2.5 CO)
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dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Universidad de Antioquia
dc.publisher.place.spa.fl_str_mv Medellín, Colombia
dc.publisher.faculty.spa.fl_str_mv Facultad de Ciencias Exactas y Naturales. Doctorado en Biología
institution Universidad de Antioquia
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spelling Sousa Botelho, María Leonor Rodrigues deIbarra Rodríguez, Adriana Alexandra2015-09-10T18:12:29Z2015-09-10T18:12:29Z2015Ibarra Rodríguez, A. A. (2015). Estudio de marcadores genéticos bialélicos para aplicaciones forenses: SNPs autosómicos e indels específicos de cromosoma X (Tesis doctoral). Universidad de Antioquia, Medellín, Colombia.http://hdl.handle.net/10495/3093ABSTRACT: The impact of molecular biology in sciences, and namely in what concerns the theme of this thesis (forensic sciences), has generated a large number of technical and theoretical developments. The application of molecular techniques to the basic sciences has always been followed by its application to forensic sciences, although the statistical principles for interpretation have remained without many variations. The subject of this thesis is inserted into the field of forensic genetics, and the main objective was to investigate the utility of new genetic markers that could be useful in certain forensic investigation scenarios, because of their molecular structure or inheritance pattern. The selection of genetic markers took into account the situation of Colombia regarding the forensic casework, in which a large number of cases cannot be solved through the use of conventional markers, such as STRs (short tandem repeats), alone. We chose to study SNP (single nucleotide polymorphism) autosomal biallelic markers, which have a molecular structure that facilitates their study on degraded samples, as well as Indel (insertion-deletion) markers located in the X chromosome, which may have advantages in some complex cases of affiliation over the autosomal markers used routinely, due to their mode of genetic transmission. With the aim stated above, a sampling was conducted in various departments of Colombia, including Huila, Arauca, Nariño (urban and native populations), Norte de Santander, Antioquia, Boyacá-Cundinamarca, Chocó, Santander, Casanare, Meta and the city of Cartagena (in the department of Bolivar). The samples obtained with informed consent of the participants for this study were genotyped using two sets of genetic markers: (1) the 52-Plex SNPforID, including 52 autosomal SNP markers; (2) and the 32 X-indels, consisting of 32 insertion deletion markers, located in X chromosome specific regions. Based on the genotypic results obtained, allele frequencies were calculated for all analyzed markers. These values were used to estimate genetic parameters of forensic interest. Furthermore, for the two studied groups of markers, population differentiation analyses were performed to evaluate whether the population was stratified and to determine the structure of a database representative of the Colombian populations for these markers…RESUMEN: El impacto de la biología molecular en las ciencias y en particular en lo que aplica para esta tesis (ciencias forenses), ha generado un gran número de desarrollos técnicos y teóricos. La aplicación de técnicas moleculares en las ciencias básicas siempre ha estado seguida por su aplicación a las ciencias forenses, aunque los principios estadísticos para su interpretación han permanecido sin muchas variaciones. El tema de esta tesis se inserta dentro del campo de la genética forense, y el principal objetivo era investigar la utilidad de nuevos marcadores genéticos que, por su estructura molecular o por el modo de transmisión que presentan, podrían ser útiles en determinados escenarios de investigación forense. La selección de los marcadores genéticos se hizo teniendo en cuenta la situación de Colombia respecto a la casuística forense, en la que aún se presentan un elevado número de casos difíciles de resolver mediante lo utilización de los marcadores convencionales tipo STRs (del inglés short tandem repeats). Se optó por estudiar marcadores autosómicos bialélicos tipo SNP (del inglés single nucleotide polymorphism), que presentan una estructura molecular que facilita su estudio en muestras degradadas y, por otro lado, se seleccionaron marcadores tipo Indel (del Inglés insertion-deletion), localizados en el cromosoma X que, por su modo de transmisión genética, en algunos casos complejos de filiación pueden presentar ventajas frente a los marcadores autosómicos utilizados de rutina. Con el objetivo enunciado anteriormente se realizó un muestreo en distintos departamentos de Colombia, incluyendo Huila, Arauca, Nariño (población urbana y nativa), Norte de Santander, Antioquia, Boyacá-Cundinamarca, Chocó, Santander, Casanare, Meta y de la ciudad de Cartagena (departamento de Bolívar). Las muestras obtenidas, con consentimiento informado de los participantes en este proyecto, se caracterizaron genotípicamente mediante dos conjuntos de marcadores genéticos: (1) el SNPforID 52-Plex, que incluye 52 marcadores genéticos autosómicos de tipo SNP; (2) y el 32 X-Indels, que se compone de 32 marcadores de tipo inserción-deleción, localizados en regiones específicas del cromosoma X…DoctoradoDoctor en Biología139application/pdfspaUniversidad de AntioquiaMedellín, ColombiaFacultad de Ciencias Exactas y Naturales. Doctorado en Biologíahttp://creativecommons.org/licenses/by-nc-nd/2.5/co/https://creativecommons.org/licenses/by-nc-nd/4.0/Atribución-NoComercial-SinDerivadas 2.5 Colombia (CC BY-NC-ND 2.5 CO)info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Estudio de marcadores genéticos bialélicos para aplicaciones forenses : SNPs autosómicos e indels específicos de cromosoma XTesis/Trabajo de grado - Monografía - Doctoradohttp://purl.org/coar/resource_type/c_db06https://purl.org/redcol/resource_type/TDinfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/acceptedVersionParámetros genéticosGenetic parametersBiologyBiologíaADNDNAMarcadores genéticosGenetic markersGenetica forenseCromosoma Xhttp://aims.fao.org/aos/agrovoc/c_24847http://aims.fao.org/aos/agrovoc/c_925http://aims.fao.org/aos/agrovoc/c_2347http://aims.fao.org/aos/agrovoc/c_24030PublicationORIGINALIbarraRodriguezA_2015_estudioMarcadoresGeneticos.pdfIbarraRodriguezA_2015_estudioMarcadoresGeneticos.pdfTesis doctoralapplication/pdf11953251https://bibliotecadigital.udea.edu.co/bitstreams/5c095966-323e-4fd8-ba8d-c47b7d483944/downloadecd9bee50acba24d597748b937795057MD51trueAnonymousREADCC-LICENSElicense_urllicense_urltext/plain; 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