Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine
ABSTRACT : Carbapenemase-producing Gram-negative bacteria (CP-GNB) have increasingly spread worldwide, and different families of carbapenemases have been identified in various bacterial species. Here, we report the identification of five VIM metallo- -lactamase-producing Alcaligenes faecalis isolate...
- Autores:
-
Al Laham, Nahed
Chavda, Kalyan
Cienfuegos Gallet, Astrid Vanessa
Kreiswirth, Barry
Chen, Liang
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2017
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/20640
- Acceso en línea:
- http://hdl.handle.net/10495/20640
- Palabra clave:
- Alcaligenes faecalis
Bacterias Gramnegativas
Gram-Negative Bacteria
Genoma Bacteriano
Genome, Bacterial
metallo-β-lactamase
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by/2.5/co/
| id |
UDEA2_519440b9e040e2a188990fc3f6c1d40b |
|---|---|
| oai_identifier_str |
oai:bibliotecadigital.udea.edu.co:10495/20640 |
| network_acronym_str |
UDEA2 |
| network_name_str |
Repositorio UdeA |
| repository_id_str |
|
| dc.title.spa.fl_str_mv |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| title |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| spellingShingle |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine Alcaligenes faecalis Bacterias Gramnegativas Gram-Negative Bacteria Genoma Bacteriano Genome, Bacterial metallo-β-lactamase |
| title_short |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| title_full |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| title_fullStr |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| title_full_unstemmed |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| title_sort |
Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, Palestine |
| dc.creator.fl_str_mv |
Al Laham, Nahed Chavda, Kalyan Cienfuegos Gallet, Astrid Vanessa Kreiswirth, Barry Chen, Liang |
| dc.contributor.author.none.fl_str_mv |
Al Laham, Nahed Chavda, Kalyan Cienfuegos Gallet, Astrid Vanessa Kreiswirth, Barry Chen, Liang |
| dc.contributor.researchgroup.spa.fl_str_mv |
Grupo de Investigación en Microbiología Básica y Aplicada-Microba |
| dc.subject.decs.none.fl_str_mv |
Alcaligenes faecalis Bacterias Gramnegativas Gram-Negative Bacteria Genoma Bacteriano Genome, Bacterial |
| topic |
Alcaligenes faecalis Bacterias Gramnegativas Gram-Negative Bacteria Genoma Bacteriano Genome, Bacterial metallo-β-lactamase |
| dc.subject.proposal.spa.fl_str_mv |
metallo-β-lactamase |
| description |
ABSTRACT : Carbapenemase-producing Gram-negative bacteria (CP-GNB) have increasingly spread worldwide, and different families of carbapenemases have been identified in various bacterial species. Here, we report the identification of five VIM metallo- -lactamase-producing Alcaligenes faecalis isolates associated with a small outbreak in a large hospital in Gaza, Palestine. Next-generation sequencing analysis showed blaVIM-2 is harbored by a chromosomal genomic island among three strains, while blaVIM-4 is carried by a novel plasmid in two strains. |
| publishDate |
2017 |
| dc.date.issued.none.fl_str_mv |
2017 |
| dc.date.accessioned.none.fl_str_mv |
2021-07-04T14:13:38Z |
| dc.date.available.none.fl_str_mv |
2021-07-04T14:13:38Z |
| dc.type.spa.fl_str_mv |
Artículo de investigación |
| dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| dc.type.redcol.spa.fl_str_mv |
https://purl.org/redcol/resource_type/ART |
| dc.type.coarversion.spa.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
| dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/article |
| dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| status_str |
publishedVersion |
| dc.identifier.issn.none.fl_str_mv |
0066-4804 |
| dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10495/20640 |
| dc.identifier.doi.none.fl_str_mv |
10.1128/AAC.01499-17 |
| dc.identifier.eissn.none.fl_str_mv |
1098-6596 |
| identifier_str_mv |
0066-4804 10.1128/AAC.01499-17 1098-6596 |
| url |
http://hdl.handle.net/10495/20640 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Antimicrob. agents chemother. |
| dc.relation.citationendpage.spa.fl_str_mv |
5 |
| dc.relation.citationissue.spa.fl_str_mv |
11 |
| dc.relation.citationstartpage.spa.fl_str_mv |
1 |
| dc.relation.citationvolume.spa.fl_str_mv |
61 |
| dc.relation.ispartofjournal.spa.fl_str_mv |
Antimicrobial Agents and Chemotherapy |
| dc.rights.uri.*.fl_str_mv |
http://creativecommons.org/licenses/by/2.5/co/ |
| dc.rights.uri.spa.fl_str_mv |
https://creativecommons.org/licenses/by/4.0/ |
| dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
| dc.rights.coar.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
| rights_invalid_str_mv |
http://creativecommons.org/licenses/by/2.5/co/ https://creativecommons.org/licenses/by/4.0/ http://purl.org/coar/access_right/c_abf2 |
| eu_rights_str_mv |
openAccess |
| dc.format.extent.spa.fl_str_mv |
5 |
| dc.format.mimetype.spa.fl_str_mv |
application/pdf |
| dc.publisher.spa.fl_str_mv |
American Society for Microbiology |
| dc.publisher.place.spa.fl_str_mv |
Washington, Estados Unidos |
| institution |
Universidad de Antioquia |
| bitstream.url.fl_str_mv |
https://bibliotecadigital.udea.edu.co/bitstreams/d1786220-be97-4a3a-8e46-0e43d45fd7b1/download https://bibliotecadigital.udea.edu.co/bitstreams/e0461d27-b27b-4cbf-a6b8-4a3d03ba46d7/download https://bibliotecadigital.udea.edu.co/bitstreams/857f60e9-63c6-4a22-b66f-44bac745a603/download https://bibliotecadigital.udea.edu.co/bitstreams/2546a3ca-1c09-43f6-b5f3-2dc4dee31534/download https://bibliotecadigital.udea.edu.co/bitstreams/7ab9b824-8ded-4897-b8c5-81792863904f/download |
| bitstream.checksum.fl_str_mv |
3e95469568a629c6dff41239dea67170 1646d1f6b96dbbbc38035efc9239ac9c 8a4605be74aa9ea9d79846c1fba20a33 7e988070611a20b9f3c525487ee8dbdd 6064ed88a03ca1135b2865181654503d |
| bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 MD5 |
| repository.name.fl_str_mv |
Repositorio Institucional de la Universidad de Antioquia |
| repository.mail.fl_str_mv |
aplicacionbibliotecadigitalbiblioteca@udea.edu.co |
| _version_ |
1851052640789594112 |
| spelling |
Al Laham, NahedChavda, KalyanCienfuegos Gallet, Astrid VanessaKreiswirth, BarryChen, LiangGrupo de Investigación en Microbiología Básica y Aplicada-Microba2021-07-04T14:13:38Z2021-07-04T14:13:38Z20170066-4804http://hdl.handle.net/10495/2064010.1128/AAC.01499-171098-6596ABSTRACT : Carbapenemase-producing Gram-negative bacteria (CP-GNB) have increasingly spread worldwide, and different families of carbapenemases have been identified in various bacterial species. Here, we report the identification of five VIM metallo- -lactamase-producing Alcaligenes faecalis isolates associated with a small outbreak in a large hospital in Gaza, Palestine. Next-generation sequencing analysis showed blaVIM-2 is harbored by a chromosomal genomic island among three strains, while blaVIM-4 is carried by a novel plasmid in two strains.COL01261315application/pdfengAmerican Society for MicrobiologyWashington, Estados Unidoshttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Genomic characterization of VIM Metallo-β-Lactamase-Producing alcaligenes faecalis from Gaza, PalestineArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionAlcaligenes faecalisBacterias GramnegativasGram-Negative BacteriaGenoma BacterianoGenome, Bacterialmetallo-β-lactamaseAntimicrob. agents chemother.511161Antimicrobial Agents and ChemotherapyPublicationORIGINALCienfuegosAstrid_2017_GenomicVIMAlcaligenes.pdfCienfuegosAstrid_2017_GenomicVIMAlcaligenes.pdfArtículo de investigaciónapplication/pdf421742https://bibliotecadigital.udea.edu.co/bitstreams/d1786220-be97-4a3a-8e46-0e43d45fd7b1/download3e95469568a629c6dff41239dea67170MD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstreams/e0461d27-b27b-4cbf-a6b8-4a3d03ba46d7/download1646d1f6b96dbbbc38035efc9239ac9cMD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/857f60e9-63c6-4a22-b66f-44bac745a603/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTCienfuegosAstrid_2017_GenomicVIMAlcaligenes.pdf.txtCienfuegosAstrid_2017_GenomicVIMAlcaligenes.pdf.txtExtracted texttext/plain26024https://bibliotecadigital.udea.edu.co/bitstreams/2546a3ca-1c09-43f6-b5f3-2dc4dee31534/download7e988070611a20b9f3c525487ee8dbddMD54falseAnonymousREADTHUMBNAILCienfuegosAstrid_2017_GenomicVIMAlcaligenes.pdf.jpgCienfuegosAstrid_2017_GenomicVIMAlcaligenes.pdf.jpgGenerated Thumbnailimage/jpeg13986https://bibliotecadigital.udea.edu.co/bitstreams/7ab9b824-8ded-4897-b8c5-81792863904f/download6064ed88a03ca1135b2865181654503dMD55falseAnonymousREAD10495/20640oai:bibliotecadigital.udea.edu.co:10495/206402025-03-27 01:29:46.633http://creativecommons.org/licenses/by/2.5/co/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.coTk9URTogUExBQ0UgWU9VUiBPV04gTElDRU5TRSBIRVJFClRoaXMgc2FtcGxlIGxpY2Vuc2UgaXMgcHJvdmlkZWQgZm9yIGluZm9ybWF0aW9uYWwgcHVycG9zZXMgb25seS4KCk5PTi1FWENMVVNJVkUgRElTVFJJQlVUSU9OIExJQ0VOU0UKCkJ5IHNpZ25pbmcgYW5kIHN1Ym1pdHRpbmcgdGhpcyBsaWNlbnNlLCB5b3UgKHRoZSBhdXRob3Iocykgb3IgY29weXJpZ2h0Cm93bmVyKSBncmFudHMgdG8gRFNwYWNlIFVuaXZlcnNpdHkgKERTVSkgdGhlIG5vbi1leGNsdXNpdmUgcmlnaHQgdG8gcmVwcm9kdWNlLAp0cmFuc2xhdGUgKGFzIGRlZmluZWQgYmVsb3cpLCBhbmQvb3IgZGlzdHJpYnV0ZSB5b3VyIHN1Ym1pc3Npb24gKGluY2x1ZGluZwp0aGUgYWJzdHJhY3QpIHdvcmxkd2lkZSBpbiBwcmludCBhbmQgZWxlY3Ryb25pYyBmb3JtYXQgYW5kIGluIGFueSBtZWRpdW0sCmluY2x1ZGluZyBidXQgbm90IGxpbWl0ZWQgdG8gYXVkaW8gb3IgdmlkZW8uCgpZb3UgYWdyZWUgdGhhdCBEU1UgbWF5LCB3aXRob3V0IGNoYW5naW5nIHRoZSBjb250ZW50LCB0cmFuc2xhdGUgdGhlCnN1Ym1pc3Npb24gdG8gYW55IG1lZGl1bSBvciBmb3JtYXQgZm9yIHRoZSBwdXJwb3NlIG9mIHByZXNlcnZhdGlvbi4KCllvdSBhbHNvIGFncmVlIHRoYXQgRFNVIG1heSBrZWVwIG1vcmUgdGhhbiBvbmUgY29weSBvZiB0aGlzIHN1Ym1pc3Npb24gZm9yCnB1cnBvc2VzIG9mIHNlY3VyaXR5LCBiYWNrLXVwIGFuZCBwcmVzZXJ2YXRpb24uCgpZb3UgcmVwcmVzZW50IHRoYXQgdGhlIHN1Ym1pc3Npb24gaXMgeW91ciBvcmlnaW5hbCB3b3JrLCBhbmQgdGhhdCB5b3UgaGF2ZQp0aGUgcmlnaHQgdG8gZ3JhbnQgdGhlIHJpZ2h0cyBjb250YWluZWQgaW4gdGhpcyBsaWNlbnNlLiBZb3UgYWxzbyByZXByZXNlbnQKdGhhdCB5b3VyIHN1Ym1pc3Npb24gZG9lcyBub3QsIHRvIHRoZSBiZXN0IG9mIHlvdXIga25vd2xlZGdlLCBpbmZyaW5nZSB1cG9uCmFueW9uZSdzIGNvcHlyaWdodC4KCklmIHRoZSBzdWJtaXNzaW9uIGNvbnRhaW5zIG1hdGVyaWFsIGZvciB3aGljaCB5b3UgZG8gbm90IGhvbGQgY29weXJpZ2h0LAp5b3UgcmVwcmVzZW50IHRoYXQgeW91IGhhdmUgb2J0YWluZWQgdGhlIHVucmVzdHJpY3RlZCBwZXJtaXNzaW9uIG9mIHRoZQpjb3B5cmlnaHQgb3duZXIgdG8gZ3JhbnQgRFNVIHRoZSByaWdodHMgcmVxdWlyZWQgYnkgdGhpcyBsaWNlbnNlLCBhbmQgdGhhdApzdWNoIHRoaXJkLXBhcnR5IG93bmVkIG1hdGVyaWFsIGlzIGNsZWFybHkgaWRlbnRpZmllZCBhbmQgYWNrbm93bGVkZ2VkCndpdGhpbiB0aGUgdGV4dCBvciBjb250ZW50IG9mIHRoZSBzdWJtaXNzaW9uLgoKSUYgVEhFIFNVQk1JU1NJT04gSVMgQkFTRUQgVVBPTiBXT1JLIFRIQVQgSEFTIEJFRU4gU1BPTlNPUkVEIE9SIFNVUFBPUlRFRApCWSBBTiBBR0VOQ1kgT1IgT1JHQU5JWkFUSU9OIE9USEVSIFRIQU4gRFNVLCBZT1UgUkVQUkVTRU5UIFRIQVQgWU9VIEhBVkUKRlVMRklMTEVEIEFOWSBSSUdIVCBPRiBSRVZJRVcgT1IgT1RIRVIgT0JMSUdBVElPTlMgUkVRVUlSRUQgQlkgU1VDSApDT05UUkFDVCBPUiBBR1JFRU1FTlQuCgpEU1Ugd2lsbCBjbGVhcmx5IGlkZW50aWZ5IHlvdXIgbmFtZShzKSBhcyB0aGUgYXV0aG9yKHMpIG9yIG93bmVyKHMpIG9mIHRoZQpzdWJtaXNzaW9uLCBhbmQgd2lsbCBub3QgbWFrZSBhbnkgYWx0ZXJhdGlvbiwgb3RoZXIgdGhhbiBhcyBhbGxvd2VkIGJ5IHRoaXMKbGljZW5zZSwgdG8geW91ciBzdWJtaXNzaW9uLgo= |