Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks
ABSTRACT: Deterministic SIR models were applied to simulate Susceptible Infected Removed and to estimate the threshold condition for varicella outbreaks in children, reported in Medellín, Colombia. The expected numbers of susceptible, infected and removed individuals were compared with observed case...
- Autores:
-
Hincapié Palacio, Doracelly
Ospina Giraldo, Juna Fernando
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2008
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/37610
- Acceso en línea:
- https://hdl.handle.net/10495/37610
- Palabra clave:
- Modelos Epidemiológicos Deterministas
Deterministic Epidemiological Models
Brotes de Enfermedades
Disease Outbreaks
Varicela
Chickenpox
Eficacia de las Vacunas
Vaccine Efficacy
Niño
Child
Colombia
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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| dc.title.spa.fl_str_mv |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| title |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| spellingShingle |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks Modelos Epidemiológicos Deterministas Deterministic Epidemiological Models Brotes de Enfermedades Disease Outbreaks Varicela Chickenpox Eficacia de las Vacunas Vaccine Efficacy Niño Child Colombia |
| title_short |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| title_full |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| title_fullStr |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| title_full_unstemmed |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| title_sort |
Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks |
| dc.creator.fl_str_mv |
Hincapié Palacio, Doracelly Ospina Giraldo, Juna Fernando |
| dc.contributor.author.none.fl_str_mv |
Hincapié Palacio, Doracelly Ospina Giraldo, Juna Fernando |
| dc.contributor.researchgroup.spa.fl_str_mv |
Epidemiología |
| dc.subject.decs.none.fl_str_mv |
Modelos Epidemiológicos Deterministas Deterministic Epidemiological Models Brotes de Enfermedades Disease Outbreaks Varicela Chickenpox Eficacia de las Vacunas Vaccine Efficacy Niño Child Colombia |
| topic |
Modelos Epidemiológicos Deterministas Deterministic Epidemiological Models Brotes de Enfermedades Disease Outbreaks Varicela Chickenpox Eficacia de las Vacunas Vaccine Efficacy Niño Child Colombia |
| description |
ABSTRACT: Deterministic SIR models were applied to simulate Susceptible Infected Removed and to estimate the threshold condition for varicella outbreaks in children, reported in Medellín, Colombia. The expected numbers of susceptible, infected and removed individuals were compared with observed cases from notification of varicella outbreaks to the local Board of Health and from survey data. The threshold condition was estimated by the basic reproductive ratio and by the relative removal rate, through which measures for preventing and curtailing the outbreaks were identified. The model demonstrated a reasonable fit to the observations, except in two of the six outbreaks which probably reflected under-registration of cases. In order to have prevented these outbreaks, between 4.4% and 52.9% of the susceptible population should have been vaccinated assuming an 85% vaccine effectiveness. Similarly, isolation of affected children should have been increased to between 4.3% and 44.8% per week. |
| publishDate |
2008 |
| dc.date.issued.none.fl_str_mv |
2008 |
| dc.date.accessioned.none.fl_str_mv |
2023-12-14T00:06:43Z |
| dc.date.available.none.fl_str_mv |
2023-12-14T00:06:43Z |
| dc.type.spa.fl_str_mv |
Artículo de investigación |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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https://purl.org/redcol/resource_type/ART |
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http://purl.org/coar/version/c_970fb48d4fbd8a85 |
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info:eu-repo/semantics/article |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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Hincapié Palacio D, Ospina Giraldo JF. Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks. Epidemiol.Infect. [Internet] 2008 [Consultado año mes día]; 136: 679-687. Disponible en: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2870859/ |
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0950-2688 |
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https://hdl.handle.net/10495/37610 |
| dc.identifier.doi.none.fl_str_mv |
10.1017/S0950268807009260 |
| dc.identifier.eissn.none.fl_str_mv |
1469-4409 |
| identifier_str_mv |
Hincapié Palacio D, Ospina Giraldo JF. Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks. Epidemiol.Infect. [Internet] 2008 [Consultado año mes día]; 136: 679-687. Disponible en: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2870859/ 0950-2688 10.1017/S0950268807009260 1469-4409 |
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https://hdl.handle.net/10495/37610 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Epidemiol. Infect. |
| dc.relation.citationendpage.spa.fl_str_mv |
687 |
| dc.relation.citationissue.spa.fl_str_mv |
5 |
| dc.relation.citationstartpage.spa.fl_str_mv |
679 |
| dc.relation.citationvolume.spa.fl_str_mv |
136 |
| dc.relation.ispartofjournal.spa.fl_str_mv |
Epidemiology and Infection |
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http://creativecommons.org/licenses/by-nc-nd/2.5/co/ |
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https://creativecommons.org/licenses/by-nc-nd/4.0/ |
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openAccess |
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9 |
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application/pdf |
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Cambridge University Press |
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Cambridge, Inglaterra |
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Universidad de Antioquia |
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Hincapié Palacio, DoracellyOspina Giraldo, Juna FernandoEpidemiología2023-12-14T00:06:43Z2023-12-14T00:06:43Z2008Hincapié Palacio D, Ospina Giraldo JF. Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaks. Epidemiol.Infect. [Internet] 2008 [Consultado año mes día]; 136: 679-687. Disponible en: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2870859/0950-2688https://hdl.handle.net/10495/3761010.1017/S09502688070092601469-4409ABSTRACT: Deterministic SIR models were applied to simulate Susceptible Infected Removed and to estimate the threshold condition for varicella outbreaks in children, reported in Medellín, Colombia. The expected numbers of susceptible, infected and removed individuals were compared with observed cases from notification of varicella outbreaks to the local Board of Health and from survey data. The threshold condition was estimated by the basic reproductive ratio and by the relative removal rate, through which measures for preventing and curtailing the outbreaks were identified. The model demonstrated a reasonable fit to the observations, except in two of the six outbreaks which probably reflected under-registration of cases. In order to have prevented these outbreaks, between 4.4% and 52.9% of the susceptible population should have been vaccinated assuming an 85% vaccine effectiveness. Similarly, isolation of affected children should have been increased to between 4.3% and 44.8% per week.COL00043629application/pdfengCambridge University PressCambridge, Inglaterrahttp://creativecommons.org/licenses/by-nc-nd/2.5/co/https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Deterministic SIR (Susceptible–Infected–Removed) models applied to varicella outbreaksArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionModelos Epidemiológicos DeterministasDeterministic Epidemiological ModelsBrotes de EnfermedadesDisease OutbreaksVaricelaChickenpoxEficacia de las VacunasVaccine EfficacyNiñoChildColombiaEpidemiol. Infect.6875679136Epidemiology and InfectionPublicationLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/3def1cf5-6f4f-403f-aaa9-11b920c85884/download8a4605be74aa9ea9d79846c1fba20a33MD54falseAnonymousREADORIGINALHincapieDoracelly_2008_DeterministicVaricellaOutbreaks.pdfHincapieDoracelly_2008_DeterministicVaricellaOutbreaks.pdfArtículo de investigaciónapplication/pdf157020https://bibliotecadigital.udea.edu.co/bitstreams/2809d0d1-a30a-4df2-805d-f2dbdcea1b86/download1f9beda91b54d7d3182e53c94e4284e4MD52trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8823https://bibliotecadigital.udea.edu.co/bitstreams/9a18b7bc-eaf4-4a57-bc10-2b0dc0e16067/downloadb88b088d9957e670ce3b3fbe2eedbc13MD53falseAnonymousREADTEXTHincapieDoracelly_2008_DeterministicVaricellaOutbreaks.pdf.txtHincapieDoracelly_2008_DeterministicVaricellaOutbreaks.pdf.txtExtracted texttext/plain35598https://bibliotecadigital.udea.edu.co/bitstreams/69fee030-c8da-4584-91f0-89b225354757/download4a54e32957db5f078cbfe39224de8cf9MD55falseAnonymousREADTHUMBNAILHincapieDoracelly_2008_DeterministicVaricellaOutbreaks.pdf.jpgHincapieDoracelly_2008_DeterministicVaricellaOutbreaks.pdf.jpgGenerated Thumbnailimage/jpeg13233https://bibliotecadigital.udea.edu.co/bitstreams/6d0c4074-1b41-4ebf-812f-56c76410d64e/downloadeb5c42176cb9bf88d40713289e771475MD56falseAnonymousREAD10495/37610oai:bibliotecadigital.udea.edu.co:10495/376102025-03-27 00:48:37.178http://creativecommons.org/licenses/by-nc-nd/2.5/co/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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 |
