Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples

ABSTRACT: Histoplasmosis, one of the most frequent endemic mycoses in the Americas, is caused by the inhalation of airborne conidia of Histoplasma capsulatum. Better understanding of the distribution of this fungus in the environment is important for the development of appropriate public health meas...

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Autores:
McEwen Ochoa, Juan Guillermo
Gómez Lonndoño, Luisa Fernanda
Peláez Jaramillo, Carlos Alberto
Arango Arteaga, Myrtha
Jiménez Alzate, María del Pilar
Gade, Lalitha
Litvintseva, Anastasia P.
Tipo de recurso:
Article of investigation
Fecha de publicación:
2022
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/42105
Acceso en línea:
https://hdl.handle.net/10495/42105
Palabra clave:
Reacción en Cadena de la Polimerasa
Polymerase Chain Reaction
Técnicas de Diagnóstico Molecular
Molecular Diagnostic Techniques
Reacción en Cadena en Tiempo Real de la Polimerasa
Real-Time Polymerase Chain Reaction
Histoplasma
Histoplasmosis
Vigilancia Sanitaria Ambiental
Environmental Health Surveillance
https://id.nlm.nih.gov/mesh/D016133
https://id.nlm.nih.gov/mesh/D025202
https://id.nlm.nih.gov/mesh/D060888
https://id.nlm.nih.gov/mesh/D006658
https://id.nlm.nih.gov/mesh/D006660
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
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network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
title Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
spellingShingle Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
Reacción en Cadena de la Polimerasa
Polymerase Chain Reaction
Técnicas de Diagnóstico Molecular
Molecular Diagnostic Techniques
Reacción en Cadena en Tiempo Real de la Polimerasa
Real-Time Polymerase Chain Reaction
Histoplasma
Histoplasmosis
Vigilancia Sanitaria Ambiental
Environmental Health Surveillance
https://id.nlm.nih.gov/mesh/D016133
https://id.nlm.nih.gov/mesh/D025202
https://id.nlm.nih.gov/mesh/D060888
https://id.nlm.nih.gov/mesh/D006658
https://id.nlm.nih.gov/mesh/D006660
title_short Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
title_full Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
title_fullStr Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
title_full_unstemmed Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
title_sort Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples
dc.creator.fl_str_mv McEwen Ochoa, Juan Guillermo
Gómez Lonndoño, Luisa Fernanda
Peláez Jaramillo, Carlos Alberto
Arango Arteaga, Myrtha
Jiménez Alzate, María del Pilar
Gade, Lalitha
Litvintseva, Anastasia P.
dc.contributor.author.none.fl_str_mv McEwen Ochoa, Juan Guillermo
Gómez Lonndoño, Luisa Fernanda
Peláez Jaramillo, Carlos Alberto
Arango Arteaga, Myrtha
Jiménez Alzate, María del Pilar
Gade, Lalitha
Litvintseva, Anastasia P.
dc.contributor.researchgroup.spa.fl_str_mv Biología Celular y Molecular CIB U. de A. U. del Rosario
Grupo Interdisciplinario de Estudios Moleculares
Micología Médica
dc.subject.decs.none.fl_str_mv Reacción en Cadena de la Polimerasa
Polymerase Chain Reaction
Técnicas de Diagnóstico Molecular
Molecular Diagnostic Techniques
Reacción en Cadena en Tiempo Real de la Polimerasa
Real-Time Polymerase Chain Reaction
Histoplasma
Histoplasmosis
Vigilancia Sanitaria Ambiental
Environmental Health Surveillance
topic Reacción en Cadena de la Polimerasa
Polymerase Chain Reaction
Técnicas de Diagnóstico Molecular
Molecular Diagnostic Techniques
Reacción en Cadena en Tiempo Real de la Polimerasa
Real-Time Polymerase Chain Reaction
Histoplasma
Histoplasmosis
Vigilancia Sanitaria Ambiental
Environmental Health Surveillance
https://id.nlm.nih.gov/mesh/D016133
https://id.nlm.nih.gov/mesh/D025202
https://id.nlm.nih.gov/mesh/D060888
https://id.nlm.nih.gov/mesh/D006658
https://id.nlm.nih.gov/mesh/D006660
dc.subject.meshuri.none.fl_str_mv https://id.nlm.nih.gov/mesh/D016133
https://id.nlm.nih.gov/mesh/D025202
https://id.nlm.nih.gov/mesh/D060888
https://id.nlm.nih.gov/mesh/D006658
https://id.nlm.nih.gov/mesh/D006660
description ABSTRACT: Histoplasmosis, one of the most frequent endemic mycoses in the Americas, is caused by the inhalation of airborne conidia of Histoplasma capsulatum. Better understanding of the distribution of this fungus in the environment is important for the development of appropriate public health measures to prevent human infections. Previously, we used Hc100 nested polymerase chain reaction (PCR) to identify H. capsulatum DNA in 10% of environmental samples in Colombia. Here, we validate a 100-kDa real-time PCR assay for the detection of this fungus in the environment. Using this method, we identified H. capsulatum DNA in 80% of samples of raw organic materials, such as chicken manure, soil from caves, and bird and bat guano, as well as in 62% of samples of organic fertilizer that underwent the composting process. We demonstrated that 100-KDa real-time PCR is a useful tool for environmental surveillance that can be used to identify the potential reservoirs of H. capsulatum and to prevent outbreaks, especially in people with the higher risk of exposure, such as spelunkers, farmers, poultry manure collectors, and anyone who handle organic fertilizers or bat and bird excreta.
publishDate 2022
dc.date.issued.none.fl_str_mv 2022
dc.date.accessioned.none.fl_str_mv 2024-09-14T15:24:56Z
dc.date.available.none.fl_str_mv 2024-09-14T15:24:56Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
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dc.identifier.citation.spa.fl_str_mv Gómez LF, Gade L, Litvintseva AP, McEwen JG, Peláez CA, Arango M, Jiménez MDP. Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples. Am J Trop Med Hyg. 2022 Mar 14;106(5):1329–32. doi: 10.4269/ajtmh.20-1396.
dc.identifier.issn.none.fl_str_mv 0002-9637
dc.identifier.uri.none.fl_str_mv https://hdl.handle.net/10495/42105
dc.identifier.doi.none.fl_str_mv 10.4269/ajtmh.20-1396
dc.identifier.eissn.none.fl_str_mv 1476-1645
identifier_str_mv Gómez LF, Gade L, Litvintseva AP, McEwen JG, Peláez CA, Arango M, Jiménez MDP. Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples. Am J Trop Med Hyg. 2022 Mar 14;106(5):1329–32. doi: 10.4269/ajtmh.20-1396.
0002-9637
10.4269/ajtmh.20-1396
1476-1645
url https://hdl.handle.net/10495/42105
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Am. J. Trop. Med. Hyg.
dc.relation.citationendpage.spa.fl_str_mv 1332
dc.relation.citationissue.spa.fl_str_mv 5
dc.relation.citationstartpage.spa.fl_str_mv 1329
dc.relation.citationvolume.spa.fl_str_mv 106
dc.relation.ispartofjournal.spa.fl_str_mv American Journal of Tropical Medicine and Hygiene
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dc.format.extent.spa.fl_str_mv 4 páginas
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dc.publisher.spa.fl_str_mv American Society of Tropical Medicine and Hygiene
dc.publisher.place.spa.fl_str_mv Baltimore, Estados Unidos
institution Universidad de Antioquia
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spelling McEwen Ochoa, Juan GuillermoGómez Lonndoño, Luisa FernandaPeláez Jaramillo, Carlos AlbertoArango Arteaga, MyrthaJiménez Alzate, María del PilarGade, LalithaLitvintseva, Anastasia P.Biología Celular y Molecular CIB U. de A. U. del RosarioGrupo Interdisciplinario de Estudios MolecularesMicología Médica2024-09-14T15:24:56Z2024-09-14T15:24:56Z2022Gómez LF, Gade L, Litvintseva AP, McEwen JG, Peláez CA, Arango M, Jiménez MDP. Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental Samples. Am J Trop Med Hyg. 2022 Mar 14;106(5):1329–32. doi: 10.4269/ajtmh.20-1396.0002-9637https://hdl.handle.net/10495/4210510.4269/ajtmh.20-13961476-1645ABSTRACT: Histoplasmosis, one of the most frequent endemic mycoses in the Americas, is caused by the inhalation of airborne conidia of Histoplasma capsulatum. Better understanding of the distribution of this fungus in the environment is important for the development of appropriate public health measures to prevent human infections. Previously, we used Hc100 nested polymerase chain reaction (PCR) to identify H. capsulatum DNA in 10% of environmental samples in Colombia. Here, we validate a 100-kDa real-time PCR assay for the detection of this fungus in the environment. Using this method, we identified H. capsulatum DNA in 80% of samples of raw organic materials, such as chicken manure, soil from caves, and bird and bat guano, as well as in 62% of samples of organic fertilizer that underwent the composting process. We demonstrated that 100-KDa real-time PCR is a useful tool for environmental surveillance that can be used to identify the potential reservoirs of H. capsulatum and to prevent outbreaks, especially in people with the higher risk of exposure, such as spelunkers, farmers, poultry manure collectors, and anyone who handle organic fertilizers or bat and bird excreta.Universidad de Antioquia. Vicerrectoría de investigación. Comité para el Desarrollo de la Investigación - CODIColombia. Ministerio de Ciencia, Tecnología e Innovación - MiniCienciasCOL0000963COL0042069COL00074624 páginasapplication/pdfengAmerican Society of Tropical Medicine and HygieneBaltimore, Estados Unidoshttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Comparison between Two Molecular Techniques: Nested and Real-Time Polymerase Chain Reaction Targeting 100-kDa Hc Protein for Detection of Histoplasma capsulatum in Environmental SamplesArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionReacción en Cadena de la PolimerasaPolymerase Chain ReactionTécnicas de Diagnóstico MolecularMolecular Diagnostic TechniquesReacción en Cadena en Tiempo Real de la PolimerasaReal-Time Polymerase Chain ReactionHistoplasmaHistoplasmosisVigilancia Sanitaria AmbientalEnvironmental Health Surveillancehttps://id.nlm.nih.gov/mesh/D016133https://id.nlm.nih.gov/mesh/D025202https://id.nlm.nih.gov/mesh/D060888https://id.nlm.nih.gov/mesh/D006658https://id.nlm.nih.gov/mesh/D006660Am. J. Trop. Med. 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