Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease

ABSTRACT: The identification of novel genetic variants contributing to the widespread in the age of onset (AOO) of Alzheimer’s disease (AD) could aid in the prognosis and/or development of new therapeutic strategies focused on early interventions. We recruited 78 individuals with AD from the Paisa g...

Full description

Autores:
Vélez Valbuena, Jorge Iván
Lopera Restrepo, Francisco Javier
Creagh, Penelope K.
Piñeros, Laura B.
Das, Debjani
Cervantes Henríquez, Martha Lucía
Acosta López, Johan
Isaza Ruget, Mario A.
Espinosa, Lady G.
Easteal, Simon
Quintero, Gustavo A.
Tamar Silva, Claudia
Mastronardi, Claudio A.
Arcos Burgos, Oscar Mauricio
Tipo de recurso:
Article of investigation
Fecha de publicación:
2019
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/23054
Acceso en línea:
http://hdl.handle.net/10495/23054
Palabra clave:
Enfermedad de Alzheimer
Alzheimer Disease
Edad de Inicio
Age of Onset
ASTN2
PSEN1
SNTG1
Rights
openAccess
License
https://creativecommons.org/licenses/by/4.0/
id UDEA2_1cf074389acded192d726fb5c9f449af
oai_identifier_str oai:bibliotecadigital.udea.edu.co:10495/23054
network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
title Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
spellingShingle Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
Enfermedad de Alzheimer
Alzheimer Disease
Edad de Inicio
Age of Onset
ASTN2
PSEN1
SNTG1
title_short Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
title_full Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
title_fullStr Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
title_full_unstemmed Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
title_sort Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's Disease
dc.creator.fl_str_mv Vélez Valbuena, Jorge Iván
Lopera Restrepo, Francisco Javier
Creagh, Penelope K.
Piñeros, Laura B.
Das, Debjani
Cervantes Henríquez, Martha Lucía
Acosta López, Johan
Isaza Ruget, Mario A.
Espinosa, Lady G.
Easteal, Simon
Quintero, Gustavo A.
Tamar Silva, Claudia
Mastronardi, Claudio A.
Arcos Burgos, Oscar Mauricio
dc.contributor.author.none.fl_str_mv Vélez Valbuena, Jorge Iván
Lopera Restrepo, Francisco Javier
Creagh, Penelope K.
Piñeros, Laura B.
Das, Debjani
Cervantes Henríquez, Martha Lucía
Acosta López, Johan
Isaza Ruget, Mario A.
Espinosa, Lady G.
Easteal, Simon
Quintero, Gustavo A.
Tamar Silva, Claudia
Mastronardi, Claudio A.
Arcos Burgos, Oscar Mauricio
dc.contributor.researchgroup.spa.fl_str_mv Grupo de Neurociencias de Antioquia
dc.subject.decs.none.fl_str_mv Enfermedad de Alzheimer
Alzheimer Disease
Edad de Inicio
Age of Onset
topic Enfermedad de Alzheimer
Alzheimer Disease
Edad de Inicio
Age of Onset
ASTN2
PSEN1
SNTG1
dc.subject.proposal.spa.fl_str_mv ASTN2
PSEN1
SNTG1
description ABSTRACT: The identification of novel genetic variants contributing to the widespread in the age of onset (AOO) of Alzheimer’s disease (AD) could aid in the prognosis and/or development of new therapeutic strategies focused on early interventions. We recruited 78 individuals with AD from the Paisa genetic isolate in Antioquia, Colombia. These individuals belong to the world largest multigenerational and extended pedigree segregating AD as a consequence of a dominant fully penetrant mutation in the PSEN1 gene and exhibit an AOO ranging from the early 1930s to the late 1970s. To shed light on the genetic underpinning that could explain the large spread of the age of onset (AOO) of AD, 64 single nucleotide polymorphisms (SNP) associated with neuroanatomical, cardiovascular, and cognitive measures in AD were genotyped. Standard quality control and filtering procedures were applied, and single- and multi-locus linear mixed-effects models were used to identify AOO-associated SNPs. A full two-locus interaction model was fitted to define how identified SNPs interact to modulate AOO. We identified two key epistatic interactions between the APOE*E2 allele and SNPs ASTN2-rs7852878 and SNTG1-rs16914781 that delay AOO by up to ~ 8 years (95% CI 3.2–12.7, P = 1.83 × 10−3) and ~ 7.6 years (95% CI 3.3–11.8, P = 8.69 × 10−4), respectively, and validated our previous finding indicating that APOE*E2 delays AOO of AD in PSEN1 E280 mutation carriers. This new evidence involving APOE*E2 as an AOO delayer could be used for developing precision medicine approaches and predictive genomics models to potentially determine AOO in individuals genetically predisposed to AD.
publishDate 2019
dc.date.issued.none.fl_str_mv 2019
dc.date.accessioned.none.fl_str_mv 2021-10-09T14:26:55Z
dc.date.available.none.fl_str_mv 2021-10-09T14:26:55Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
dc.type.redcol.spa.fl_str_mv https://purl.org/redcol/resource_type/ART
dc.type.coarversion.spa.fl_str_mv http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.driver.spa.fl_str_mv info:eu-repo/semantics/article
dc.type.version.spa.fl_str_mv info:eu-repo/semantics/publishedVersion
format http://purl.org/coar/resource_type/c_2df8fbb1
status_str publishedVersion
dc.identifier.citation.spa.fl_str_mv Vélez, J.I., Lopera, F., Creagh, P.K. et al. Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer’s Disease. Mol Neurobiol 56, 3235–3243 (2019). https://doi.org/10.1007/s12035-018-1298-z
dc.identifier.issn.none.fl_str_mv 0893-7648
dc.identifier.other.none.fl_str_mv 1559-1182
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/23054
dc.identifier.doi.none.fl_str_mv 10.1007/s12035-018-1298-z
identifier_str_mv Vélez, J.I., Lopera, F., Creagh, P.K. et al. Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer’s Disease. Mol Neurobiol 56, 3235–3243 (2019). https://doi.org/10.1007/s12035-018-1298-z
0893-7648
1559-1182
10.1007/s12035-018-1298-z
url http://hdl.handle.net/10495/23054
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Mol. Neurobiol.
dc.relation.citationendpage.spa.fl_str_mv 3243
dc.relation.citationstartpage.spa.fl_str_mv 3235
dc.relation.citationvolume.spa.fl_str_mv 56
dc.relation.ispartofjournal.spa.fl_str_mv Molecular Neurobiology
dc.rights.uri.spa.fl_str_mv https://creativecommons.org/licenses/by/4.0/
dc.rights.uri.*.fl_str_mv http://creativecommons.org/licenses/by/2.5/co/
dc.rights.accessrights.spa.fl_str_mv info:eu-repo/semantics/openAccess
dc.rights.coar.spa.fl_str_mv http://purl.org/coar/access_right/c_abf2
rights_invalid_str_mv https://creativecommons.org/licenses/by/4.0/
http://creativecommons.org/licenses/by/2.5/co/
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.extent.spa.fl_str_mv 9
dc.format.mimetype.spa.fl_str_mv application/pdf
dc.publisher.spa.fl_str_mv Springer
dc.publisher.place.spa.fl_str_mv Clifton, Estados Unidos
institution Universidad de Antioquia
bitstream.url.fl_str_mv https://bibliotecadigital.udea.edu.co/bitstreams/afc9acda-41f7-486e-9b5e-b66c50e13b46/download
https://bibliotecadigital.udea.edu.co/bitstreams/a346db1d-d9aa-4bbf-b49d-2b823bacd3e7/download
https://bibliotecadigital.udea.edu.co/bitstreams/6f2088e0-a81a-4796-b954-3d599726c1f6/download
https://bibliotecadigital.udea.edu.co/bitstreams/5328064b-25be-4373-ab63-f22e337d52a3/download
https://bibliotecadigital.udea.edu.co/bitstreams/016a2c97-165b-4773-b8a8-2080927d2a38/download
bitstream.checksum.fl_str_mv c6c2291e2d0bb475166ddc0eadc50797
1646d1f6b96dbbbc38035efc9239ac9c
8a4605be74aa9ea9d79846c1fba20a33
fe9aa0ebec1eaf4b1aa8ce0f90607d0a
8d98c1a7e92ee700dae271e95ca2eb2b
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositorio Institucional de la Universidad de Antioquia
repository.mail.fl_str_mv aplicacionbibliotecadigitalbiblioteca@udea.edu.co
_version_ 1851052417668349952
spelling Vélez Valbuena, Jorge IvánLopera Restrepo, Francisco JavierCreagh, Penelope K.Piñeros, Laura B.Das, DebjaniCervantes Henríquez, Martha LucíaAcosta López, JohanIsaza Ruget, Mario A.Espinosa, Lady G.Easteal, SimonQuintero, Gustavo A.Tamar Silva, ClaudiaMastronardi, Claudio A.Arcos Burgos, Oscar MauricioGrupo de Neurociencias de Antioquia2021-10-09T14:26:55Z2021-10-09T14:26:55Z2019Vélez, J.I., Lopera, F., Creagh, P.K. et al. Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer’s Disease. Mol Neurobiol 56, 3235–3243 (2019). https://doi.org/10.1007/s12035-018-1298-z0893-76481559-1182http://hdl.handle.net/10495/2305410.1007/s12035-018-1298-zABSTRACT: The identification of novel genetic variants contributing to the widespread in the age of onset (AOO) of Alzheimer’s disease (AD) could aid in the prognosis and/or development of new therapeutic strategies focused on early interventions. We recruited 78 individuals with AD from the Paisa genetic isolate in Antioquia, Colombia. These individuals belong to the world largest multigenerational and extended pedigree segregating AD as a consequence of a dominant fully penetrant mutation in the PSEN1 gene and exhibit an AOO ranging from the early 1930s to the late 1970s. To shed light on the genetic underpinning that could explain the large spread of the age of onset (AOO) of AD, 64 single nucleotide polymorphisms (SNP) associated with neuroanatomical, cardiovascular, and cognitive measures in AD were genotyped. Standard quality control and filtering procedures were applied, and single- and multi-locus linear mixed-effects models were used to identify AOO-associated SNPs. A full two-locus interaction model was fitted to define how identified SNPs interact to modulate AOO. We identified two key epistatic interactions between the APOE*E2 allele and SNPs ASTN2-rs7852878 and SNTG1-rs16914781 that delay AOO by up to ~ 8 years (95% CI 3.2–12.7, P = 1.83 × 10−3) and ~ 7.6 years (95% CI 3.3–11.8, P = 8.69 × 10−4), respectively, and validated our previous finding indicating that APOE*E2 delays AOO of AD in PSEN1 E280 mutation carriers. This new evidence involving APOE*E2 as an AOO delayer could be used for developing precision medicine approaches and predictive genomics models to potentially determine AOO in individuals genetically predisposed to AD.COL00107449application/pdfengSpringerClifton, Estados Unidoshttps://creativecommons.org/licenses/by/4.0/http://creativecommons.org/licenses/by/2.5/co/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Targeting Neuroplasticity, Cardiovascular, and Cognitive-Associated Genomic Variants in Familial Alzheimer's DiseaseArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionEnfermedad de AlzheimerAlzheimer DiseaseEdad de InicioAge of OnsetASTN2PSEN1SNTG1Mol. Neurobiol.3243323556Molecular NeurobiologyPublicationORIGINALLoperaFrancisco_2019_NeuroplasticityCardiovascularCognitive.pdfLoperaFrancisco_2019_NeuroplasticityCardiovascularCognitive.pdfArtículo de investigaciónapplication/pdf737041https://bibliotecadigital.udea.edu.co/bitstreams/afc9acda-41f7-486e-9b5e-b66c50e13b46/downloadc6c2291e2d0bb475166ddc0eadc50797MD51trueAnonymousREADCC-LICENSElicense_rdflicense_rdfapplication/rdf+xml; charset=utf-8927https://bibliotecadigital.udea.edu.co/bitstreams/a346db1d-d9aa-4bbf-b49d-2b823bacd3e7/download1646d1f6b96dbbbc38035efc9239ac9cMD52falseAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/6f2088e0-a81a-4796-b954-3d599726c1f6/download8a4605be74aa9ea9d79846c1fba20a33MD53falseAnonymousREADTEXTLoperaFrancisco_2019_NeuroplasticityCardiovascularCognitive.pdf.txtLoperaFrancisco_2019_NeuroplasticityCardiovascularCognitive.pdf.txtExtracted texttext/plain47522https://bibliotecadigital.udea.edu.co/bitstreams/5328064b-25be-4373-ab63-f22e337d52a3/downloadfe9aa0ebec1eaf4b1aa8ce0f90607d0aMD54falseAnonymousREADTHUMBNAILLoperaFrancisco_2019_NeuroplasticityCardiovascularCognitive.pdf.jpgLoperaFrancisco_2019_NeuroplasticityCardiovascularCognitive.pdf.jpgGenerated Thumbnailimage/jpeg14210https://bibliotecadigital.udea.edu.co/bitstreams/016a2c97-165b-4773-b8a8-2080927d2a38/download8d98c1a7e92ee700dae271e95ca2eb2bMD55falseAnonymousREAD10495/23054oai:bibliotecadigital.udea.edu.co:10495/230542025-03-26 22:02:15.461https://creativecommons.org/licenses/by/4.0/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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