Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family
ABSTRACT: The heterogeneity of the clinical outcome of Mycobacterium tuberculosis (Mtb) infection may be due in part to different strategies used by circulating strains to cause disease. This heterogeneity is one of the main limitations to eradicate tuberculosis disease. In this study, we have compa...
- Autores:
-
Baena García, Andrés
Cabarcas Jaramillo, Felipe
Alzate Restrepo, Juan Fernando
Álvarez Eraso, Karen Luisa Fernanda
Isaza Agudelo, Juan Pablo
Barrera Robledo, Luis Fernando
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2019
- Institución:
- Universidad de Antioquia
- Repositorio:
- Repositorio UdeA
- Idioma:
- eng
- OAI Identifier:
- oai:bibliotecadigital.udea.edu.co:10495/43136
- Acceso en línea:
- https://hdl.handle.net/10495/43136
- Palabra clave:
- Colombia
Mycobacterium tuberculosis
RNA-Seq
Fenotipo
Phenotype
Virulencia
Virulence
Transcriptoma
Transcriptome
Tuberculosis - microbiología
Tuberculosis - microbiology
https://id.nlm.nih.gov/mesh/D003105
https://id.nlm.nih.gov/mesh/D009169
https://id.nlm.nih.gov/mesh/D000081246
https://id.nlm.nih.gov/mesh/D010641
https://id.nlm.nih.gov/mesh/D014774
https://id.nlm.nih.gov/mesh/D059467
https://id.nlm.nih.gov/mesh/D014376
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-nd/2.5/co/
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Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| title |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| spellingShingle |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family Colombia Mycobacterium tuberculosis RNA-Seq Fenotipo Phenotype Virulencia Virulence Transcriptoma Transcriptome Tuberculosis - microbiología Tuberculosis - microbiology https://id.nlm.nih.gov/mesh/D003105 https://id.nlm.nih.gov/mesh/D009169 https://id.nlm.nih.gov/mesh/D000081246 https://id.nlm.nih.gov/mesh/D010641 https://id.nlm.nih.gov/mesh/D014774 https://id.nlm.nih.gov/mesh/D059467 https://id.nlm.nih.gov/mesh/D014376 |
| title_short |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| title_full |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| title_fullStr |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| title_full_unstemmed |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| title_sort |
Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family |
| dc.creator.fl_str_mv |
Baena García, Andrés Cabarcas Jaramillo, Felipe Alzate Restrepo, Juan Fernando Álvarez Eraso, Karen Luisa Fernanda Isaza Agudelo, Juan Pablo Barrera Robledo, Luis Fernando |
| dc.contributor.author.none.fl_str_mv |
Baena García, Andrés Cabarcas Jaramillo, Felipe Alzate Restrepo, Juan Fernando Álvarez Eraso, Karen Luisa Fernanda Isaza Agudelo, Juan Pablo Barrera Robledo, Luis Fernando |
| dc.contributor.researchgroup.spa.fl_str_mv |
Grupo de Inmunología Celular e Inmunogenética Grupo de Parasitología, Universidad de Antioquia Sistemas Embebidos e Inteligencia Computacional (SISTEMIC) |
| dc.subject.decs.none.fl_str_mv |
Colombia Mycobacterium tuberculosis RNA-Seq Fenotipo Phenotype Virulencia Virulence Transcriptoma Transcriptome Tuberculosis - microbiología Tuberculosis - microbiology |
| topic |
Colombia Mycobacterium tuberculosis RNA-Seq Fenotipo Phenotype Virulencia Virulence Transcriptoma Transcriptome Tuberculosis - microbiología Tuberculosis - microbiology https://id.nlm.nih.gov/mesh/D003105 https://id.nlm.nih.gov/mesh/D009169 https://id.nlm.nih.gov/mesh/D000081246 https://id.nlm.nih.gov/mesh/D010641 https://id.nlm.nih.gov/mesh/D014774 https://id.nlm.nih.gov/mesh/D059467 https://id.nlm.nih.gov/mesh/D014376 |
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https://id.nlm.nih.gov/mesh/D003105 https://id.nlm.nih.gov/mesh/D009169 https://id.nlm.nih.gov/mesh/D000081246 https://id.nlm.nih.gov/mesh/D010641 https://id.nlm.nih.gov/mesh/D014774 https://id.nlm.nih.gov/mesh/D059467 https://id.nlm.nih.gov/mesh/D014376 |
| description |
ABSTRACT: The heterogeneity of the clinical outcome of Mycobacterium tuberculosis (Mtb) infection may be due in part to different strategies used by circulating strains to cause disease. This heterogeneity is one of the main limitations to eradicate tuberculosis disease. In this study, we have compared the transcriptional response of two closely related Colombian clinical isolates (UT127 and UT205) of the LAM family under two axenic media conditions. These clinical isolates are phenotypically different at the level of cell death, cytokine production, growth kinetics upon in vitro infection of human tissue macrophages, and membrane vesicle secretion upon culture in synthetic medium. Using RNA-seq, we have identified different pathways that account for two different strategies to cope with the stressful condition of a carbon-poor media such as Sauton's. We showed that the clinical isolate UT205 focus mainly in the activation of virulence systems such as the ESX-1, synthesis of diacyl-trehalose, polyacyl-trehalose, and sulfolipids, while UT127 concentrates its efforts mainly in the survival mode by the activation of the DNA replication, cell division, and lipid biosynthesis. This is an example of two Mtb isolates that belong to the same family and lineage, and even though they have a very similar genome, its transcriptional regulation showed important differences. This results in summary highlight the necessity to reach a better understanding of the heterogeneity in the behavior of these circulating Mtb strains which may help us to design better treatments and vaccines and to identify new targets for drugs. |
| publishDate |
2019 |
| dc.date.issued.none.fl_str_mv |
2019 |
| dc.date.accessioned.none.fl_str_mv |
2024-11-04T15:25:32Z |
| dc.date.available.none.fl_str_mv |
2024-11-04T15:25:32Z |
| dc.type.spa.fl_str_mv |
Artículo de investigación |
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http://purl.org/coar/resource_type/c_2df8fbb1 |
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http://purl.org/coar/version/c_970fb48d4fbd8a85 |
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info:eu-repo/semantics/article |
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Baena A, Cabarcas F, Alvarez-Eraso KLF, Isaza JP, Alzate JF, Barrera LF. Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family. Virulence. 2019 Dec;10(1):695-710. doi: 10.1080/21505594.2019.1642045. |
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2150-5594 |
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https://hdl.handle.net/10495/43136 |
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10.1080/21505594.2019.1642045. |
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2150-5608 |
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Baena A, Cabarcas F, Alvarez-Eraso KLF, Isaza JP, Alzate JF, Barrera LF. Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family. Virulence. 2019 Dec;10(1):695-710. doi: 10.1080/21505594.2019.1642045. 2150-5594 10.1080/21505594.2019.1642045. 2150-5608 |
| url |
https://hdl.handle.net/10495/43136 |
| dc.language.iso.spa.fl_str_mv |
eng |
| language |
eng |
| dc.relation.ispartofjournalabbrev.spa.fl_str_mv |
Virulence |
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710 |
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1 |
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695 |
| dc.relation.citationvolume.spa.fl_str_mv |
10 |
| dc.relation.ispartofjournal.spa.fl_str_mv |
Virulence |
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16 páginas |
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application/pdf |
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Taylor & Francis Open Access |
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Austin, Estados Unidos |
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Universidad de Antioquia |
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Baena García, AndrésCabarcas Jaramillo, FelipeAlzate Restrepo, Juan FernandoÁlvarez Eraso, Karen Luisa FernandaIsaza Agudelo, Juan PabloBarrera Robledo, Luis FernandoGrupo de Inmunología Celular e InmunogenéticaGrupo de Parasitología, Universidad de AntioquiaSistemas Embebidos e Inteligencia Computacional (SISTEMIC)2024-11-04T15:25:32Z2024-11-04T15:25:32Z2019Baena A, Cabarcas F, Alvarez-Eraso KLF, Isaza JP, Alzate JF, Barrera LF. Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family. Virulence. 2019 Dec;10(1):695-710. doi: 10.1080/21505594.2019.1642045.2150-5594https://hdl.handle.net/10495/4313610.1080/21505594.2019.1642045.2150-5608ABSTRACT: The heterogeneity of the clinical outcome of Mycobacterium tuberculosis (Mtb) infection may be due in part to different strategies used by circulating strains to cause disease. This heterogeneity is one of the main limitations to eradicate tuberculosis disease. In this study, we have compared the transcriptional response of two closely related Colombian clinical isolates (UT127 and UT205) of the LAM family under two axenic media conditions. These clinical isolates are phenotypically different at the level of cell death, cytokine production, growth kinetics upon in vitro infection of human tissue macrophages, and membrane vesicle secretion upon culture in synthetic medium. Using RNA-seq, we have identified different pathways that account for two different strategies to cope with the stressful condition of a carbon-poor media such as Sauton's. We showed that the clinical isolate UT205 focus mainly in the activation of virulence systems such as the ESX-1, synthesis of diacyl-trehalose, polyacyl-trehalose, and sulfolipids, while UT127 concentrates its efforts mainly in the survival mode by the activation of the DNA replication, cell division, and lipid biosynthesis. This is an example of two Mtb isolates that belong to the same family and lineage, and even though they have a very similar genome, its transcriptional regulation showed important differences. This results in summary highlight the necessity to reach a better understanding of the heterogeneity in the behavior of these circulating Mtb strains which may help us to design better treatments and vaccines and to identify new targets for drugs.Universidad de Antioquia. Vicerrectoría de investigación. Comité para el Desarrollo de la Investigación - CODIColombia. Ministerio de Ciencia, Tecnología e Innovación - MinCienciasCOL0008639COL0007506COL001071716 páginasapplication/pdfengTaylor & Francis Open AccessAustin, Estados Unidoshttp://creativecommons.org/licenses/by-nc-nd/2.5/co/https://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 familyArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionColombiaMycobacterium tuberculosisRNA-SeqFenotipoPhenotypeVirulenciaVirulenceTranscriptomaTranscriptomeTuberculosis - microbiologíaTuberculosis - microbiologyhttps://id.nlm.nih.gov/mesh/D003105https://id.nlm.nih.gov/mesh/D009169https://id.nlm.nih.gov/mesh/D000081246https://id.nlm.nih.gov/mesh/D010641https://id.nlm.nih.gov/mesh/D014774https://id.nlm.nih.gov/mesh/D059467https://id.nlm.nih.gov/mesh/D014376Virulence710169510VirulenceCODI 2014–765MinCiencias 111571250266RoR:03bp5hc83RoR:03fd5ne08PublicationORIGINALBaenaAndres_2019_Differential_Determinants_Virulence.pdfBaenaAndres_2019_Differential_Determinants_Virulence.pdfArtículo de investigaciónapplication/pdf3405802https://bibliotecadigital.udea.edu.co/bitstreams/a8e7ef5c-2843-4e58-9940-e5a959e7ac59/downloadc8263603d040e5b4d1da44c1380b0af1MD51trueAnonymousREADLICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://bibliotecadigital.udea.edu.co/bitstreams/3fb4a5b7-0db1-4362-8cc3-9ad9266d1d56/download8a4605be74aa9ea9d79846c1fba20a33MD52falseAnonymousREADTEXTBaenaAndres_2019_Differential_Determinants_Virulence.pdf.txtBaenaAndres_2019_Differential_Determinants_Virulence.pdf.txtExtracted texttext/plain76658https://bibliotecadigital.udea.edu.co/bitstreams/d146e2ac-233e-4ac3-b47d-ec85595fd050/downloadc05cea781430f3f6a03068cf0fe9b920MD53falseAnonymousREADTHUMBNAILBaenaAndres_2019_Differential_Determinants_Virulence.pdf.jpgBaenaAndres_2019_Differential_Determinants_Virulence.pdf.jpgGenerated Thumbnailimage/jpeg16889https://bibliotecadigital.udea.edu.co/bitstreams/1a836dd3-cff5-4f3d-b355-62f22bbab33f/download7d09e1f4c50a3cd49da9c69467579d25MD54falseAnonymousREAD10495/43136oai:bibliotecadigital.udea.edu.co:10495/431362025-03-26 23:11:54.194http://creativecommons.org/licenses/by-nc-nd/2.5/co/open.accesshttps://bibliotecadigital.udea.edu.coRepositorio Institucional de la Universidad de Antioquiaaplicacionbibliotecadigitalbiblioteca@udea.edu.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 |
