Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates

ABSTARCT: A major concern in malaria vaccine development is the polymorphism observed among different Plasmodium isolates in different geographical areas across the globe. The merozoite surface protein 1 (MSP-1) is a leading vaccine candidate antigen against asexual blood stages of malaria parasite....

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Autores:
Maestre Buitrago, Amanda Elena
Sunil, Sujatha
Ahmad, Gul
Mohmmed, Asif
Echeverri, Marcela
Corredor Rodríguez, Mauricio
Blair Trujillo, Silvia
Chauhan, Virander
Malhotra, Pawan
Tipo de recurso:
Article of investigation
Fecha de publicación:
2004
Institución:
Universidad de Antioquia
Repositorio:
Repositorio UdeA
Idioma:
eng
OAI Identifier:
oai:bibliotecadigital.udea.edu.co:10495/11590
Acceso en línea:
http://hdl.handle.net/10495/11590
Palabra clave:
Amino Acids
Protozoan genomes
Merozoite Surface Protein 1
Molecular Sequence Data
Genetic Variation
Aminoácidos de Cadena Ramificada
Plasmodium vivax
Polymerase Chain Reaction
ADN Polimerasas
Rights
openAccess
License
http://creativecommons.org/licenses/by/2.5/co/
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network_acronym_str UDEA2
network_name_str Repositorio UdeA
repository_id_str
dc.title.spa.fl_str_mv Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
title Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
spellingShingle Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
Amino Acids
Protozoan genomes
Merozoite Surface Protein 1
Molecular Sequence Data
Genetic Variation
Aminoácidos de Cadena Ramificada
Plasmodium vivax
Polymerase Chain Reaction
ADN Polimerasas
title_short Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
title_full Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
title_fullStr Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
title_full_unstemmed Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
title_sort Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates
dc.creator.fl_str_mv Maestre Buitrago, Amanda Elena
Sunil, Sujatha
Ahmad, Gul
Mohmmed, Asif
Echeverri, Marcela
Corredor Rodríguez, Mauricio
Blair Trujillo, Silvia
Chauhan, Virander
Malhotra, Pawan
dc.contributor.author.none.fl_str_mv Maestre Buitrago, Amanda Elena
Sunil, Sujatha
Ahmad, Gul
Mohmmed, Asif
Echeverri, Marcela
Corredor Rodríguez, Mauricio
Blair Trujillo, Silvia
Chauhan, Virander
Malhotra, Pawan
dc.contributor.researchgroup.spa.fl_str_mv Grupo Malaria
GEBIOMIC (Genética y Bioquímica de Microorganismos)
Salud y Comunidad
dc.subject.none.fl_str_mv Amino Acids
Protozoan genomes
Merozoite Surface Protein 1
Molecular Sequence Data
Genetic Variation
Aminoácidos de Cadena Ramificada
Plasmodium vivax
Polymerase Chain Reaction
ADN Polimerasas
topic Amino Acids
Protozoan genomes
Merozoite Surface Protein 1
Molecular Sequence Data
Genetic Variation
Aminoácidos de Cadena Ramificada
Plasmodium vivax
Polymerase Chain Reaction
ADN Polimerasas
description ABSTARCT: A major concern in malaria vaccine development is the polymorphism observed among different Plasmodium isolates in different geographical areas across the globe. The merozoite surface protein 1 (MSP-1) is a leading vaccine candidate antigen against asexual blood stages of malaria parasite. To date, little is known about the extent of sequence variation in the Plasmodium vivax MSP-1 gene (Pvmsp-1) among Indian isolates. Since P. vivax accounts for >50% of malaria cases in India and in Colombia, it is essential to know the Pvmsp-1 gene variability in these two countries to sustain it as a vaccine candidate. The extent of polymorphism in Pvmsp-1 gene among Indian and Colombian isolates is described. Methods: The sequence variation in the region encompassing the inter-species conserved blocks (ICBs) five and six of Pvmsp-1 gene was examined. PCR was carried out to amplify the polymorphic region of Pvmsp-1 and the PCR products from twenty (nine Indian and 11 Colombian) isolates were sequenced and aligned with Belem and Salvador-1 sequences. Results: Results revealed three distinct types of sequences among these isolates, namely, Salvador-like, Belem-like and a third type sequence which was generated due to interallelic recombination between Salvador-like sequences and Belem-like sequences. Existence of the third type in majority (44%) showed that allelic recombinations play an important role in PvMSP1 diversity in natural parasite population. Micro-heterogeneity was also seen in a few of these isolates due to nucleotide substitutions, insertions as well as deletions. Conclusions: Intergenic recombination in the Pvmsp-1 gene was found and suggest that this is the main cause for genetic diversity of the Pvmsp-1 gene.
publishDate 2004
dc.date.issued.none.fl_str_mv 2004
dc.date.accessioned.none.fl_str_mv 2019-07-31T21:01:43Z
dc.date.available.none.fl_str_mv 2019-07-31T21:01:43Z
dc.type.spa.fl_str_mv Artículo de investigación
dc.type.coar.spa.fl_str_mv http://purl.org/coar/resource_type/c_2df8fbb1
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dc.identifier.citation.spa.fl_str_mv Maestre A, Sunil S, Ahmad G, Mohmmed A, Echeverri M, Corredor M, Blair S, Chauhan VS, Malhotra P. Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates. Malar J. 2004 Mar 5;3:4
dc.identifier.issn.none.fl_str_mv 1475-2875
dc.identifier.uri.none.fl_str_mv http://hdl.handle.net/10495/11590
dc.identifier.doi.none.fl_str_mv 10.1186/1475-2875-3-1
identifier_str_mv Maestre A, Sunil S, Ahmad G, Mohmmed A, Echeverri M, Corredor M, Blair S, Chauhan VS, Malhotra P. Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates. Malar J. 2004 Mar 5;3:4
1475-2875
10.1186/1475-2875-3-1
url http://hdl.handle.net/10495/11590
dc.language.iso.spa.fl_str_mv eng
language eng
dc.relation.ispartofjournalabbrev.spa.fl_str_mv Malar. J.
dc.relation.citationendpage.spa.fl_str_mv 6
dc.relation.citationissue.spa.fl_str_mv 3
dc.relation.citationstartpage.spa.fl_str_mv 1
dc.relation.citationvolume.spa.fl_str_mv 5
dc.relation.ispartofjournal.spa.fl_str_mv Malaria Journal
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dc.rights.accessrights.*.fl_str_mv Atribución 2.5
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dc.publisher.spa.fl_str_mv BMC (BioMed Central)
dc.publisher.place.spa.fl_str_mv Reino Unido
institution Universidad de Antioquia
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spelling Maestre Buitrago, Amanda ElenaSunil, SujathaAhmad, GulMohmmed, AsifEcheverri, MarcelaCorredor Rodríguez, MauricioBlair Trujillo, SilviaChauhan, ViranderMalhotra, PawanGrupo MalariaGEBIOMIC (Genética y Bioquímica de Microorganismos)Salud y Comunidad2019-07-31T21:01:43Z2019-07-31T21:01:43Z2004Maestre A, Sunil S, Ahmad G, Mohmmed A, Echeverri M, Corredor M, Blair S, Chauhan VS, Malhotra P. Inter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolates. Malar J. 2004 Mar 5;3:41475-2875http://hdl.handle.net/10495/1159010.1186/1475-2875-3-1ABSTARCT: A major concern in malaria vaccine development is the polymorphism observed among different Plasmodium isolates in different geographical areas across the globe. The merozoite surface protein 1 (MSP-1) is a leading vaccine candidate antigen against asexual blood stages of malaria parasite. To date, little is known about the extent of sequence variation in the Plasmodium vivax MSP-1 gene (Pvmsp-1) among Indian isolates. Since P. vivax accounts for >50% of malaria cases in India and in Colombia, it is essential to know the Pvmsp-1 gene variability in these two countries to sustain it as a vaccine candidate. The extent of polymorphism in Pvmsp-1 gene among Indian and Colombian isolates is described. Methods: The sequence variation in the region encompassing the inter-species conserved blocks (ICBs) five and six of Pvmsp-1 gene was examined. PCR was carried out to amplify the polymorphic region of Pvmsp-1 and the PCR products from twenty (nine Indian and 11 Colombian) isolates were sequenced and aligned with Belem and Salvador-1 sequences. Results: Results revealed three distinct types of sequences among these isolates, namely, Salvador-like, Belem-like and a third type sequence which was generated due to interallelic recombination between Salvador-like sequences and Belem-like sequences. Existence of the third type in majority (44%) showed that allelic recombinations play an important role in PvMSP1 diversity in natural parasite population. Micro-heterogeneity was also seen in a few of these isolates due to nucleotide substitutions, insertions as well as deletions. Conclusions: Intergenic recombination in the Pvmsp-1 gene was found and suggest that this is the main cause for genetic diversity of the Pvmsp-1 gene.COL0014064COL0007524COL00474496application/pdfengBMC (BioMed Central)Reino Unidohttp://creativecommons.org/licenses/by/2.5/co/https://creativecommons.org/licenses/by/4.0/Atribución 2.5info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2Amino AcidsProtozoan genomesMerozoite Surface Protein 1Molecular Sequence DataGenetic VariationAminoácidos de Cadena RamificadaPlasmodium vivaxPolymerase Chain ReactionADN PolimerasasInter-allelic recombination in the Plasmodium vivax merozoite surface protein 1 gene among Indian and Colombian isolatesArtículo de investigaciónhttp://purl.org/coar/resource_type/c_2df8fbb1https://purl.org/redcol/resource_type/ARThttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionMalar. 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