Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real
- Autores:
-
Phandanouvong, Vienvilay
Betancourt, Liliana
Rodriguez, Fernando
- Tipo de recurso:
- Article of journal
- Fecha de publicación:
- 2009
- Institución:
- Universidad de Córdoba
- Repositorio:
- Repositorio Institucional Unicórdoba
- Idioma:
- spa
- OAI Identifier:
- oai:repositorio.unicordoba.edu.co:ucordoba/5548
- Acceso en línea:
- https://repositorio.unicordoba.edu.co/handle/ucordoba/5548
https://doi.org/10.21897/rmvz.327
- Palabra clave:
- RT-PCR
specificity
efficiency
lactic acid bacteria
Lactobacillus
Bifidobacterium
- Rights
- openAccess
- License
- https://creativecommons.org/licenses/by-nc-sa/4.0/
| id |
UCORDOBA2_1fe8cabdaa0742a8310b8dcb098411cb |
|---|---|
| oai_identifier_str |
oai:repositorio.unicordoba.edu.co:ucordoba/5548 |
| network_acronym_str |
UCORDOBA2 |
| network_name_str |
Repositorio Institucional Unicórdoba |
| repository_id_str |
|
| dc.title.spa.fl_str_mv |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| dc.title.translated.eng.fl_str_mv |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| title |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| spellingShingle |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real RT-PCR specificity efficiency lactic acid bacteria Lactobacillus Bifidobacterium |
| title_short |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| title_full |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| title_fullStr |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| title_full_unstemmed |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| title_sort |
Determinación y cuantificación de bacterias acidolácticas por PCR en tiempo real |
| dc.creator.fl_str_mv |
Phandanouvong, Vienvilay Betancourt, Liliana Rodriguez, Fernando |
| dc.contributor.author.spa.fl_str_mv |
Phandanouvong, Vienvilay Betancourt, Liliana Rodriguez, Fernando |
| dc.subject.spa.fl_str_mv |
RT-PCR specificity efficiency lactic acid bacteria Lactobacillus Bifidobacterium |
| topic |
RT-PCR specificity efficiency lactic acid bacteria Lactobacillus Bifidobacterium |
| publishDate |
2009 |
| dc.date.issued.none.fl_str_mv |
2009-01-01 |
| dc.date.accessioned.none.fl_str_mv |
2010-01-01 00:00:00 2022-07-01T20:59:05Z |
| dc.date.available.none.fl_str_mv |
2010-01-01 00:00:00 2022-07-01T20:59:05Z |
| dc.type.spa.fl_str_mv |
Artículo de revista |
| dc.type.eng.fl_str_mv |
Journal article |
| dc.type.coar.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
| dc.type.driver.spa.fl_str_mv |
info:eu-repo/semantics/article |
| dc.type.coar.spa.fl_str_mv |
http://purl.org/coar/resource_type/c_6501 http://purl.org/coar/resource_type/c_6501 |
| dc.type.version.spa.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
| dc.type.content.spa.fl_str_mv |
Text |
| dc.type.redcol.spa.fl_str_mv |
http://purl.org/redcol/resource_type/ARTREF |
| dc.type.coarversion.spa.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
| format |
http://purl.org/coar/resource_type/c_6501 |
| status_str |
publishedVersion |
| dc.identifier.issn.none.fl_str_mv |
0122-0268 |
| dc.identifier.uri.none.fl_str_mv |
https://repositorio.unicordoba.edu.co/handle/ucordoba/5548 |
| dc.identifier.doi.none.fl_str_mv |
10.21897/rmvz.327 |
| dc.identifier.url.none.fl_str_mv |
https://doi.org/10.21897/rmvz.327 |
| dc.identifier.eissn.none.fl_str_mv |
1909-0544 |
| identifier_str_mv |
0122-0268 10.21897/rmvz.327 1909-0544 |
| url |
https://repositorio.unicordoba.edu.co/handle/ucordoba/5548 https://doi.org/10.21897/rmvz.327 |
| dc.language.iso.spa.fl_str_mv |
spa |
| language |
spa |
| dc.relation.references.spa.fl_str_mv |
Pfaffl MW. A new mathematical model for relative quantification in real time RT-PCR. Nucleic Acids Res 2001; 29(9): 2003-2007. http://dx.doi.org/10.1093/nar/29.9.e45 Kubista M, Andrade JM, Bengtsson M, Forootan A, Jonak J, Lind K et al. The real-time polymerase chain reaction. Mol Aspects Med 2006; 27:95-125. http://dx.doi.org/10.1016/j.mam.2005.12.007 Larionov A, Krause A, Miller W. A standard curve based method for relative real time PCR data processing. BMC Bioinformatics 2005; 6:62-78. http://dx.doi.org/10.1186/1471-2105-6-62 Viljoen GJ, Nel LH, Crowther JR. Molecular diagnostic PCR handbook. Dordrecht, Holanda: Editorial Springer; 2005. Granja CB, Vidal OM, Parra G, Salazar M. Hyperthermia reduces viral load of white spot syndrome virus in Penaeus vannamei. Dis Aquat Org 2006; 68:175-180. http://dx.doi.org/10.3354/dao068175 Bustin SA, Mueller R. Real-time reverse transcription PCR (qRT-PCR) and its potential use in clinical diagnosis. Clin Sci 2005; 109:365-379. http://dx.doi.org/10.1042/CS20050086 Rutledge RG, Côté C. Mathematics of quantitative kinetic PCR and the application of standard curves. Nucleic Acids Res 2003; 31(16):e93-e99. Mocellin S, Rossi CR, Pilati P., Nitti D, Marincola FM. Quantitative real-time PCR: a powerful ally in cancer research. Trends Mol Med 2003; 9(5):189-195. http://dx.doi.org/10.1016/S1471-4914(03)00047-9 Makkar HPS, McSweeney CS. Methods in gut microbial ecology for rumiants. Dordrecht, Holanda: Editorial Springer; 2005. Dorak MT. Real-time PCR. New York, EUA: Editorial Taylor & Francis Group; 2006. Matsuki T, Watanabe K, Fujimoto J, Takada T, Tanaka R. Use of 16S rDNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces. Appl Environm Microbiol 2004; 70(12):7220-7228. http://dx.doi.org/10.1128/AEM.70.12.7220-7228.2004 Wang RF, Cao WW, Cerniglia CE. PCR detection and quantification of predominant anaerobic bacteria in human and animal fecal samples. Appl Environm Microbiol 1996; 62(4):1242-1247. Haarmann M, Knol J. Quantitative real-time PCR analysis of fecal Lactobacillus species in infants receiving a prebiotic infant formula. Appl Environm Microbiol 2006; 72:2359-2365. http://dx.doi.org/10.1128/AEM.72.4.2359-2365.2006 Bartosch S, Fite A, Macfarlane JT, McMurdo MET. Characterization of bacterial communities in feces from healthy elderly volunteers and hospitalized elderly patients by using real-time PCR and effects of antibiotic treatment on the fecal Microbiota Appl Environm Microbiol 2004; 70(6):3575-3581. Lan Y, Xun S, Tamminga S, Williams BA, Verstegen MW, Erdit G. Real-Time PCR detection of lactic acid bacteria in cecal contents of Eimeria tenella-infected broilers fed soybean oligosaccharides and soluble soybean polysaccharides. Poult Sci 2004; 83:1696-1702. http://dx.doi.org/10.1093/ps/83.10.1696 Bartosch S, Woodmansey EJ, Paterson JCM, McMurdo MET, Macfarlane GT. Microbiological effects of consuming a symbiotic containing Bifidobacterium bifidum, Bifidobacterium lactis and oligofructose in elderly persons, determined by real-time polymerase chain reaction and counting of viable bacteria. Clin Infect Dis 2005; 40(1):28-37. http://dx.doi.org/10.1086/426027 Thakuria D, Schimdt O, Siurtain MM, Egan D, Doohan FM. Importance of DNA quality in comparative soil microbial community structure analysis. Soil Biol Biochem 2008; 40:1390-1403. http://dx.doi.org/10.1016/j.soilbio.2007.12.027 Tajima K, Aminov RI, Nagamine T, Matsui H, Nakamura M, Benno Y. Diet-dependent shifts in the bacterial population of the rumen revealed with real-time PCR. Appl Environ Microbiol 2001; 67:2766-2774. http://dx.doi.org/10.1128/AEM.67.6.2766-2774.2001 |
| dc.relation.bitstream.none.fl_str_mv |
https://revistamvz.unicordoba.edu.co/article/download/327/395 |
| dc.relation.citationedition.spa.fl_str_mv |
Núm. 1 , Año 2010 : Revista MVZ Córdoba Volumen 15(1) Enero-Abril 2010 |
| dc.relation.citationissue.spa.fl_str_mv |
1 |
| dc.relation.citationvolume.spa.fl_str_mv |
15 |
| dc.relation.ispartofjournal.spa.fl_str_mv |
Revista MVZ Córdoba |
| dc.rights.uri.spa.fl_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0/ |
| dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
| dc.rights.coar.spa.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
| rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc-sa/4.0/ http://purl.org/coar/access_right/c_abf2 |
| eu_rights_str_mv |
openAccess |
| dc.format.mimetype.spa.fl_str_mv |
application/pdf |
| dc.publisher.spa.fl_str_mv |
Universidad de Córdoba |
| dc.source.spa.fl_str_mv |
https://revistamvz.unicordoba.edu.co/article/view/327 |
| institution |
Universidad de Córdoba |
| bitstream.url.fl_str_mv |
https://dspace8-unicordoba.metabuscador.org/bitstreams/e5cd72d3-95e5-43d6-99a3-560dc4f50f81/download |
| bitstream.checksum.fl_str_mv |
b071b5b77a61bfd7f9fdfc422ac8bc2b |
| bitstream.checksumAlgorithm.fl_str_mv |
MD5 |
| repository.name.fl_str_mv |
Repositorio institucional Universidad de Córdoba |
| repository.mail.fl_str_mv |
bdigital@metabiblioteca.com |
| _version_ |
1849968230845644800 |
| spelling |
Phandanouvong, VienvilayBetancourt, LilianaRodriguez, Fernando2010-01-01 00:00:002022-07-01T20:59:05Z2010-01-01 00:00:002022-07-01T20:59:05Z2009-01-010122-0268https://repositorio.unicordoba.edu.co/handle/ucordoba/554810.21897/rmvz.327https://doi.org/10.21897/rmvz.3271909-0544application/pdfspaUniversidad de Córdobahttps://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccesshttp://purl.org/coar/access_right/c_abf2https://revistamvz.unicordoba.edu.co/article/view/327RT-PCRspecificityefficiencylactic acid bacteriaLactobacillusBifidobacteriumDeterminación y cuantificación de bacterias acidolácticas por PCR en tiempo realDeterminación y cuantificación de bacterias acidolácticas por PCR en tiempo realArtículo de revistaJournal articleinfo:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_6501http://purl.org/coar/resource_type/c_2df8fbb1info:eu-repo/semantics/publishedVersionTexthttp://purl.org/redcol/resource_type/ARTREFhttp://purl.org/coar/version/c_970fb48d4fbd8a85Pfaffl MW. A new mathematical model for relative quantification in real time RT-PCR. Nucleic Acids Res 2001; 29(9): 2003-2007. http://dx.doi.org/10.1093/nar/29.9.e45Kubista M, Andrade JM, Bengtsson M, Forootan A, Jonak J, Lind K et al. The real-time polymerase chain reaction. Mol Aspects Med 2006; 27:95-125. http://dx.doi.org/10.1016/j.mam.2005.12.007Larionov A, Krause A, Miller W. A standard curve based method for relative real time PCR data processing. BMC Bioinformatics 2005; 6:62-78. http://dx.doi.org/10.1186/1471-2105-6-62Viljoen GJ, Nel LH, Crowther JR. Molecular diagnostic PCR handbook. Dordrecht, Holanda: Editorial Springer; 2005.Granja CB, Vidal OM, Parra G, Salazar M. Hyperthermia reduces viral load of white spot syndrome virus in Penaeus vannamei. Dis Aquat Org 2006; 68:175-180. http://dx.doi.org/10.3354/dao068175Bustin SA, Mueller R. Real-time reverse transcription PCR (qRT-PCR) and its potential use in clinical diagnosis. Clin Sci 2005; 109:365-379. http://dx.doi.org/10.1042/CS20050086Rutledge RG, Côté C. Mathematics of quantitative kinetic PCR and the application of standard curves. Nucleic Acids Res 2003; 31(16):e93-e99.Mocellin S, Rossi CR, Pilati P., Nitti D, Marincola FM. Quantitative real-time PCR: a powerful ally in cancer research. Trends Mol Med 2003; 9(5):189-195. http://dx.doi.org/10.1016/S1471-4914(03)00047-9Makkar HPS, McSweeney CS. Methods in gut microbial ecology for rumiants. Dordrecht, Holanda: Editorial Springer; 2005.Dorak MT. Real-time PCR. New York, EUA: Editorial Taylor & Francis Group; 2006.Matsuki T, Watanabe K, Fujimoto J, Takada T, Tanaka R. Use of 16S rDNA gene-targeted group-specific primers for real-time PCR analysis of predominant bacteria in human feces. Appl Environm Microbiol 2004; 70(12):7220-7228. http://dx.doi.org/10.1128/AEM.70.12.7220-7228.2004Wang RF, Cao WW, Cerniglia CE. PCR detection and quantification of predominant anaerobic bacteria in human and animal fecal samples. Appl Environm Microbiol 1996; 62(4):1242-1247.Haarmann M, Knol J. Quantitative real-time PCR analysis of fecal Lactobacillus species in infants receiving a prebiotic infant formula. Appl Environm Microbiol 2006; 72:2359-2365. http://dx.doi.org/10.1128/AEM.72.4.2359-2365.2006Bartosch S, Fite A, Macfarlane JT, McMurdo MET. Characterization of bacterial communities in feces from healthy elderly volunteers and hospitalized elderly patients by using real-time PCR and effects of antibiotic treatment on the fecal Microbiota Appl Environm Microbiol 2004; 70(6):3575-3581.Lan Y, Xun S, Tamminga S, Williams BA, Verstegen MW, Erdit G. Real-Time PCR detection of lactic acid bacteria in cecal contents of Eimeria tenella-infected broilers fed soybean oligosaccharides and soluble soybean polysaccharides. Poult Sci 2004; 83:1696-1702. http://dx.doi.org/10.1093/ps/83.10.1696Bartosch S, Woodmansey EJ, Paterson JCM, McMurdo MET, Macfarlane GT. Microbiological effects of consuming a symbiotic containing Bifidobacterium bifidum, Bifidobacterium lactis and oligofructose in elderly persons, determined by real-time polymerase chain reaction and counting of viable bacteria. Clin Infect Dis 2005; 40(1):28-37. http://dx.doi.org/10.1086/426027Thakuria D, Schimdt O, Siurtain MM, Egan D, Doohan FM. Importance of DNA quality in comparative soil microbial community structure analysis. Soil Biol Biochem 2008; 40:1390-1403. http://dx.doi.org/10.1016/j.soilbio.2007.12.027Tajima K, Aminov RI, Nagamine T, Matsui H, Nakamura M, Benno Y. Diet-dependent shifts in the bacterial population of the rumen revealed with real-time PCR. Appl Environ Microbiol 2001; 67:2766-2774. http://dx.doi.org/10.1128/AEM.67.6.2766-2774.2001https://revistamvz.unicordoba.edu.co/article/download/327/395Núm. 1 , Año 2010 : Revista MVZ Córdoba Volumen 15(1) Enero-Abril 2010115Revista MVZ CórdobaPublicationOREORE.xmltext/xml2597https://dspace8-unicordoba.metabuscador.org/bitstreams/e5cd72d3-95e5-43d6-99a3-560dc4f50f81/downloadb071b5b77a61bfd7f9fdfc422ac8bc2bMD51falseAnonymousREADucordoba/5548oai:dspace8-unicordoba.metabuscador.org:ucordoba/55482023-10-06 00:45:40.45https://creativecommons.org/licenses/by-nc-sa/4.0/metadata.onlyhttps://dspace8-unicordoba.metabuscador.orgRepositorio institucional Universidad de Córdobabdigital@metabiblioteca.com |