Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.
Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association w...
- Autores:
-
Prahalad, Sampath
Bohnsack, John
Jonsson, Roland
Bolstad, Anne Isine
Brun, Johan G.
Cobb, Beth
Moser, Kathy L.
James, Judith A.
Nath, Swapan K.
Cherñavsky, Alejandra
Cañas Dávila, Carlos Alberto
Anaya, Juan Manuel
Rojas Villarraga, Adriana
- Tipo de recurso:
- Article of investigation
- Fecha de publicación:
- 2012
- Institución:
- Universidad ICESI
- Repositorio:
- Repositorio ICESI
- Idioma:
- eng
- OAI Identifier:
- oai:repository.icesi.edu.co:10906/78472
- Acceso en línea:
- http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1
http://hdl.handle.net/10906/78472
http://dx.doi.org/10.1016/j.autrev.2011.07.007
- Palabra clave:
- ITGAM
Enfermedades autoinmunes
Predisposicion genética
Lupus eritematoso sistémico
Ciencias socio biomédicas
Evaluación genética
Medical sciences
- Rights
- openAccess
- License
- http://creativecommons.org/licenses/by-nc-nd/4.0/
id |
ICESI2_781399ebf78344bb07c80e2a4d1db8de |
---|---|
oai_identifier_str |
oai:repository.icesi.edu.co:10906/78472 |
network_acronym_str |
ICESI2 |
network_name_str |
Repositorio ICESI |
repository_id_str |
|
dc.title.spa.fl_str_mv |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
title |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
spellingShingle |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. ITGAM Enfermedades autoinmunes Predisposicion genética Lupus eritematoso sistémico Ciencias socio biomédicas Evaluación genética Medical sciences |
title_short |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
title_full |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
title_fullStr |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
title_full_unstemmed |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
title_sort |
Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases. |
dc.creator.fl_str_mv |
Prahalad, Sampath Bohnsack, John Jonsson, Roland Bolstad, Anne Isine Brun, Johan G. Cobb, Beth Moser, Kathy L. James, Judith A. Nath, Swapan K. Cherñavsky, Alejandra Cañas Dávila, Carlos Alberto Anaya, Juan Manuel Rojas Villarraga, Adriana |
dc.contributor.author.spa.fl_str_mv |
Prahalad, Sampath Bohnsack, John Jonsson, Roland Bolstad, Anne Isine Brun, Johan G. Cobb, Beth Moser, Kathy L. James, Judith A. Nath, Swapan K. Cherñavsky, Alejandra Cañas Dávila, Carlos Alberto Anaya, Juan Manuel Rojas Villarraga, Adriana |
dc.subject.proposal.spa.fl_str_mv |
ITGAM Enfermedades autoinmunes Predisposicion genética Lupus eritematoso sistémico Ciencias socio biomédicas Evaluación genética |
topic |
ITGAM Enfermedades autoinmunes Predisposicion genética Lupus eritematoso sistémico Ciencias socio biomédicas Evaluación genética Medical sciences |
dc.subject.proposal.eng.fl_str_mv |
Medical sciences |
description |
Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association with others ADs. ITGAM and its associated 'predisposing' variant (rs1143679, Arg77His), predicted to alter the tertiary structures of the ligand-binding domain of ITGAM, may play a key role for SLE pathogenesis. The aim of this study is to examine whether the ITGAM variant is also associated with other ADs. We evaluated case-control association between rs1143679 and ADs (N=18,457) including primary Sjögren's syndrome, systemic sclerosis, multiple sclerosis, rheumatoid arthritis, juvenile idiopathic arthritis, celiac disease, and type-1 diabetes. We also performed meta-analyses using our data in addition to available published data. Although the risk allele 'A' is relatively more frequent among cases for each disease, it was not significantly associated with any other ADs tested in this study. However, the meta-analysis for systemic sclerosis was associated with rs1143679 (p(meta)=0.008). In summary, this study explored the role of ITGAM in general autoimmunity in seven non-lupus ADs, and only found association for systemic sclerosis when our results were combined with published results. Thus ITGAM may not be a general autoimmunity gene but this variant may be specifically associated with SLE and systemic sclerosis. |
publishDate |
2012 |
dc.date.issued.none.fl_str_mv |
2012-02-12 |
dc.date.accessioned.none.fl_str_mv |
2015-10-13T21:05:57Z |
dc.date.available.none.fl_str_mv |
2015-10-13T21:05:57Z |
dc.type.coar.none.fl_str_mv |
http://purl.org/coar/resource_type/c_2df8fbb1 |
dc.type.local.spa.fl_str_mv |
Artículo |
dc.type.version.none.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.coarversion.none.fl_str_mv |
http://purl.org/coar/version/c_970fb48d4fbd8a85 |
dc.type.driver.eng.fl_str_mv |
info:eu-repo/semantics/article |
format |
http://purl.org/coar/resource_type/c_2df8fbb1 |
status_str |
publishedVersion |
dc.identifier.ismn.none.fl_str_mv |
0896-8411 |
dc.identifier.other.spa.fl_str_mv |
http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1 |
dc.identifier.uri.none.fl_str_mv |
http://hdl.handle.net/10906/78472 |
dc.identifier.doi.none.fl_str_mv |
http://dx.doi.org/10.1016/j.autrev.2011.07.007 |
dc.identifier.instname.none.fl_str_mv |
instname:Universidad Icesi |
dc.identifier.reponame.none.fl_str_mv |
reponame:Biblioteca Digital |
dc.identifier.repourl.none.fl_str_mv |
repourl:https://repository.icesi.edu.co/ |
identifier_str_mv |
0896-8411 instname:Universidad Icesi reponame:Biblioteca Digital repourl:https://repository.icesi.edu.co/ |
url |
http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1 http://hdl.handle.net/10906/78472 http://dx.doi.org/10.1016/j.autrev.2011.07.007 |
dc.language.iso.none.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.none.fl_str_mv |
Autoimmunity Reviews, Volume 11, Issue 4 - 2012, Pages 276-280 |
dc.relation.citationstartpage.none.fl_str_mv |
276 |
dc.relation.citationendpage.none.fl_str_mv |
280 |
dc.rights.uri.none.fl_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ |
dc.rights.accessrights.spa.fl_str_mv |
info:eu-repo/semantics/openAccess |
dc.rights.license.none.fl_str_mv |
Atribución-NoComercial-SinDerivadas 4.0 Internacional (CC BY-NC-ND 4.0) |
dc.rights.coar.none.fl_str_mv |
http://purl.org/coar/access_right/c_abf2 |
rights_invalid_str_mv |
http://creativecommons.org/licenses/by-nc-nd/4.0/ Atribución-NoComercial-SinDerivadas 4.0 Internacional (CC BY-NC-ND 4.0) http://purl.org/coar/access_right/c_abf2 |
eu_rights_str_mv |
openAccess |
dc.format.extent.none.fl_str_mv |
4 |
dc.format.medium.spa.fl_str_mv |
Digital |
dc.format.mimetype.none.fl_str_mv |
application/pdf |
dc.coverage.spatial.none.fl_str_mv |
Amsterdam de Lat: 52 21 00 N degrees minutes Lat: 52.3500 decimal degrees Long: 004 55 00 E degrees minutes Long: 4.9167 decimal degrees |
dc.publisher.none.fl_str_mv |
Elsevier |
dc.publisher.faculty.spa.fl_str_mv |
Facultad Ciencias de la Salud |
dc.publisher.program.spa.fl_str_mv |
Medicina |
dc.publisher.department.spa.fl_str_mv |
Departamento de Ciencias Básicas Médicas |
dc.publisher.place.none.fl_str_mv |
Amsterdam |
publisher.none.fl_str_mv |
Elsevier |
institution |
Universidad ICESI |
bitstream.url.fl_str_mv |
https://repository.icesi.edu.co/bitstreams/49450beb-2224-4493-8956-a324ecb472fd/download https://repository.icesi.edu.co/bitstreams/b6a89260-591d-4627-a4d3-c63f802943d1/download |
bitstream.checksum.fl_str_mv |
73cf28dc4a4501e03059c3b922459b30 4317415cf813501ac35510fcea4dc8aa |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 |
repository.name.fl_str_mv |
Biblioteca Digital - Universidad Icesi |
repository.mail.fl_str_mv |
adquisicion-bib@listas.icesi.edu.co |
_version_ |
1841720142752382976 |
spelling |
Prahalad, Sampath7a1f7708-b51f-46c9-b0c4-6a69511dcdc3-1Bohnsack, John13f8a1ee-b62b-48ed-b1df-5dc3a229db17-1Jonsson, Rolanda6297537-d600-4dd7-9dc7-e1835aa68acd-1Bolstad, Anne Isine395837f4-4675-463b-a04b-cf8e1c3d8460-1Brun, Johan G.78569d9b-4dca-4e24-8118-6342852fda54-1Cobb, Beth024d6eae-0972-4624-8a64-9edab3882147-1Moser, Kathy L.189cad82-f0eb-4fa2-88d2-effa9cac03f9-1James, Judith A.d5432c01-c9ce-47ad-9161-eab55046817d-1Nath, Swapan K.447f8e67-846e-42fa-9422-cdd551b54048-1Cherñavsky, Alejandra9b42c671-6359-48ee-ab93-9cc1628bc84e-1Cañas Dávila, Carlos Albertof6cb08bb-4d92-453e-adb3-1b8dc5cd7368-1Anaya, Juan Manuela5d8925c-a674-4f67-84ab-5604ff0118cd-1Rojas Villarraga, Adriana0b1aea05-4718-47d9-89ec-47d97d78c370-1Amsterdam de Lat: 52 21 00 N degrees minutes Lat: 52.3500 decimal degrees Long: 004 55 00 E degrees minutes Long: 4.9167 decimal degrees2015-10-13T21:05:57Z2015-10-13T21:05:57Z2012-02-120896-8411http://apps.webofknowledge.com/full_record.do?product=UA&search_mode=GeneralSearch&qid=29&SID=1CAmjdNsnrMlFqXnadP&page=1&doc=1http://hdl.handle.net/10906/78472http://dx.doi.org/10.1016/j.autrev.2011.07.007instname:Universidad Icesireponame:Biblioteca Digitalrepourl:https://repository.icesi.edu.co/Many autoimmune diseases (ADs) share similar underlying pathology and have a tendency to cluster within families, supporting the involvement of shared susceptibility genes. To date, most of the genetic variants associated with systemic lupus erythematosus (SLE) susceptibility also show association with others ADs. ITGAM and its associated 'predisposing' variant (rs1143679, Arg77His), predicted to alter the tertiary structures of the ligand-binding domain of ITGAM, may play a key role for SLE pathogenesis. The aim of this study is to examine whether the ITGAM variant is also associated with other ADs. We evaluated case-control association between rs1143679 and ADs (N=18,457) including primary Sjögren's syndrome, systemic sclerosis, multiple sclerosis, rheumatoid arthritis, juvenile idiopathic arthritis, celiac disease, and type-1 diabetes. We also performed meta-analyses using our data in addition to available published data. Although the risk allele 'A' is relatively more frequent among cases for each disease, it was not significantly associated with any other ADs tested in this study. However, the meta-analysis for systemic sclerosis was associated with rs1143679 (p(meta)=0.008). In summary, this study explored the role of ITGAM in general autoimmunity in seven non-lupus ADs, and only found association for systemic sclerosis when our results were combined with published results. Thus ITGAM may not be a general autoimmunity gene but this variant may be specifically associated with SLE and systemic sclerosis.4Digitalapplication/pdfengElsevierFacultad Ciencias de la SaludMedicinaDepartamento de Ciencias Básicas MédicasAmsterdamAutoimmunity Reviews, Volume 11, Issue 4 - 2012, Pages 276-280276280EL AUTOR, expresa que la obra objeto de la presente autorización es original y la elaboró sin quebrantar ni suplantar los derechos de autor de terceros, y de tal forma, la obra es de su exclusiva autoría y tiene la titularidad sobre éste. PARÁGRAFO: en caso de queja o acción por parte de un tercero referente a los derechos de autor sobre el artículo, folleto o libro en cuestión, EL AUTOR, asumirá la responsabilidad total, y saldrá en defensa de los derechos aquí autorizados; para todos los efectos, la Universidad Icesi actúa como un tercero de buena fe. Esta autorización, permite a la Universidad Icesi, de forma indefinida, para que en los términos establecidos en la Ley 23 de 1982, la Ley 44 de 1993, leyes y jurisprudencia vigente al respecto, haga publicación de este con fines educativos. Toda persona que consulte ya sea la biblioteca o en medio electrónico podrá copiar apartes del texto citando siempre la fuentes, es decir el título del trabajo y el autor.http://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessAtribución-NoComercial-SinDerivadas 4.0 Internacional (CC BY-NC-ND 4.0)http://purl.org/coar/access_right/c_abf2Evaluation of genetic association between an ITGAM non-synonymous SNP (rs1143679) and multiple autoimmune diseases.Comunidad Universidad Icesi – Investigadores114ITGAMEnfermedades autoinmunesPredisposicion genéticaLupus eritematoso sistémicoCiencias socio biomédicasEvaluación genéticaMedical scienceshttp://purl.org/coar/resource_type/c_2df8fbb1Artículoinfo:eu-repo/semantics/publishedVersionhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleORIGINALanaya_evaluation_genetic_2012.pdfanaya_evaluation_genetic_2012.pdfapplication/pdf519536https://repository.icesi.edu.co/bitstreams/49450beb-2224-4493-8956-a324ecb472fd/download73cf28dc4a4501e03059c3b922459b30MD51THUMBNAILanaya_evaluation_genetic_2012.pdf.jpganaya_evaluation_genetic_2012.pdf.jpgIM Thumbnailimage/jpeg13484https://repository.icesi.edu.co/bitstreams/b6a89260-591d-4627-a4d3-c63f802943d1/download4317415cf813501ac35510fcea4dc8aaMD5210906/78472oai:repository.icesi.edu.co:10906/784722025-08-17 22:01:58.609http://creativecommons.org/licenses/by-nc-nd/4.0/Atribución-NoComercial-SinDerivadas 4.0 Internacional (CC BY-NC-ND 4.0)open.accesshttps://repository.icesi.edu.coBiblioteca Digital - Universidad Icesiadquisicion-bib@listas.icesi.edu.co |